Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1497 ATGACAGACAAGGTCCACCCTTCAGCCAAGCCCACCGGCAATGGCACCGCCGCCGCCAACATCTCATTACCGCCGACAAAATCCCAACTCCACGGCCCCAACCGCCCCACCTACCGTCCCCGTGCTGCACCCCCTCGCCGCCGCAGCAGCAACAGTTGCTGCTGCACACTCTTCTGCTGGCTCATCCTCATCCTCTTCATCCTCATCATCCTCCTCGGCGCCGCCGGCGCCGTCCTCTACTTCCTCTACCACCCTCAACGCCCTTCCTTCACCGTCACGTCACTCAAACTTTCCACCTTCAAACTCTCCTCCTCCTCCTCCACCCTCACCTCCAAGTTCCAACTCACACTCTCCGCCACCAACCCCAACAAAAAGATCACATTCTTCTACCAGCCCACCTCGGTAAACATCCTCACCGGCGACATGGACGTCGGAGATGGTGTCATTCCGTCGTTCGAGCACGGGAAGGAGAACACCACGGTGCTGAAAATCCCGGTGGCGAGGAGCGGAGAGGTGGCGGCGGATGACGCCGTGAAGGGGAGCTTGAAGAGCAAGAGTGCACTGGCGTTGAAGGTGAAGATGGAGACGAAGGTGGAGGCCAAGATGGGGATGTTCAGGACACCACGCGTTGGAATCAGAGTGTTGTGTGATGGTATCCAGGTTACTCTTCCCGCCGGCGAGAAACCGGCGACGGCGTCGGCTGTGAACTCTGCATGTGCGGTGGACGTGAGGTTCAAGTTCTGGAAATGGACTCTTGGATGA 762 0.5892 MTDKVHPSAKPTGNGTAAANISLPPTKSQLHGPNRPTYRPRAAPPRRRSSNSCCCTLFCWLILILFILIILLGAAGAVLYFLYHPQRPSFTVTSLKLSTFKLSSSSSTLTSKFQLTLSATNPNKKITFFYQPTSVNILTGDMDVGDGVIPSFEHGKENTTVLKIPVARSGEVAADDAVKGSLKSKSALALKVKMETKVEAKMGMFRTPRVGIRVLCDGIQVTLPAGEKPATASAVNSACAVDVRFKFWKWTLG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1497 253 SUPERFAMILY LEA14-like 66 169 - -
Lja3g1497 253 MobiDBLite consensus disorder prediction 1 51 - -
Lja3g1497 253 MobiDBLite consensus disorder prediction 7 33 - -
Lja3g1497 253 Pfam Late embryogenesis abundant protein 116 214 IPR004864 -
Lja3g1497 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 251 - -
Lja3g1497 253 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 10 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1497 Lja-Chr3 16051862 16053013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1497 19 216 EF-hand Containing Proteins AT5G21130 23.585 1.54e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1497 - - gmx:100819194 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1497 3 16051862 16053013 Lja3g1497 3 16051862 16053013 ECH
Lja3g5031 3 92495660 92497009 Lja3g1497 3 16051862 16053013 PCT