Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4976 ATGGCGAATCTGGTTCCTGGTGTGCTTCTGAAGCTGTTACAGCACATGAATACAGATGTGAAGGTTGGAGGGGAGCATAGATCATCACTGTTGCAAGTTGTGAGCATTGTTCCTGCGCTTGCAGGTGGAGAATTGTTTCCGAATCAAGGGTTTTATCTGAAGGTTTCAGATTCGTCTCATGCTACGTATGTTTCTCTGCCTGATGAAGATGATGATCTTATTTTGAGTGATAAGATTCAGCTGGGGCAGTTTGTGTTTGTGGATCGCGTCGAGGCGGCTTCGCCGGTTCCGATTTTGAGAGGGGTTAGGCCTGTTCCGGGGAGGCATCCTTGTGTAGGAACACCTGAAGATATTGTTGCCACTCATCCACTTGCATTTCTGAATAATGGTGGTGGTTCTTCTGGGGAGAAGGTGAAGGAGAAGGAGAAGGAGAGGAGAGTGAGATCAAATGGGGTTGGTAGTGGTGGTGGTGGTGGTGGTGGTATGGGAGAAGGATCAGAGAAGAAGAGTGGTCTTCTTGGTAGGTTTAAATCACAGGCTCAGCCAACAAAGCCAGCAGCACTGAAGATTGATGTGAAGAAGGAACCGTTGCCTCGGATGAAGTCTATGAATTCAAGGTCGATTCCTTCGTCGCCGAGTAGTTGCTACTCGTTGCCGACTTCTTTTGAGAAATTTGCCAATGGGGTGAAGCAGCAGCAGGCAAAGGTTAGTGGTAAGAGGGTGGAGAAGGTCACTGCAAATGTGGGAGTGGTGGAGACAGGAAAAGGTGGTTCTTCTGGGAAGAAAATGGTGGTGGGGAATCCAATCAGAAATTGGATGCAGGGTATTGACCTTGGGGCTAAGGTTCTGCGGAAGAGCTGGGAAGGGAATATGGAGGTCAAGACTAGAGAGTCTCCCAGAGCTAGGGGTGCTGCCAAGGTTGATCCTAAGCCTGAAGTTCGTAGCTCGACTCCTAGGAGAAGCTTCTCGAATGGGAAGTTGCCATCTAAAGAAGTCCAAGCACCAACAAAGTCTTCCAAGGACGAACATAAGACTCAGATGTCTATAAAGAAGGCTACTGCTAATGGAACTTTGGAGGAACAAGAAAAGTCAAGTAAACAAAGAACTTCCATTGGAAAGAAATCAGCAGAAGTTGCTAACCACGGACTCCCCGGAAACTTGGTCAAAGTTTCTCTCAATAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCCTCATCTATTTCAAAGATTGGAAGGGAAGTTATGAGGCACAGAGATGCGGCACAGATAGCAGCAAATGAGGCTATGCAAGAGGCTGCCGCCGCTGAGAGTTTGCTGCAATGTCTAAGTAAGTATTCGGAGTTAACAAATTCTGCGAAGGAAGAGAACCCCCAGCCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTAAACAGTACCCTGATGATTGCTGAATCATTATCTAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAGGAGCAAATTGGAAGAAGCACTGAAACTAAAATCAGAAAGACAAAAACACGCATCTTCATGGGTCCAAGCAGCATTGGCCACGAATCTTTCATCCTTCGCTGTTTTCACAAGAGAACCTCAATCATCCAAGCTTCCAGCTTCAAGTAATTCTCAAAATCAGAAGACTCTCATGGGAAATCAGCCCATGTTAGTACTACACAATTCTTCAAGTGAAGATTCTTCATCAAAAGTTCCTGGGAAAACTCGTCAACCACTTTATTCCAAGCACGCCTCACAAGGAGCTACTCGCAAACCTGGTGATGGGTCAGCAAACAGGCACAAGCAGCTAGTCCAACCACCGCTCCCGGAGTGGGTTAGGGGAAATGGCCTCGATGAGGTGGTTAATTTGGCTGAAATGTTGCAATTACAGTCCCGAGACTGGTTCGTAGGATTCGTTGAGAGGTTCTTGGACATTGACGGGGACAATACCTTGTCAGATAATGGCCAAATTGCAGGTATGCTCTCTCAGCTGAAGAGTGTAAATGATTGGTTAGATGAGATAGGGTCGAGCAGGGACGAGGAAGACGAGGGAGAATCATGCCAGATTCCAGCAGAGACGATTGACCGACTAAGGAAGAAGATATACGAATATCTTCTTACTCATGTTGAGTCTGCTGCTGCTGCACTCAGTGGTGGACCACAATCATCATCAACTCCGATCCAAACAACACAGATTAAAGGCAAAAGGTGA 2226 0.4654 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEDDDLILSDKIQLGQFVFVDRVEAASPVPILRGVRPVPGRHPCVGTPEDIVATHPLAFLNNGGGSSGEKVKEKEKERRVRSNGVGSGGGGGGGMGEGSEKKSGLLGRFKSQAQPTKPAALKIDVKKEPLPRMKSMNSRSIPSSPSSCYSLPTSFEKFANGVKQQQAKVSGKRVEKVTANVGVVETGKGGSSGKKMVVGNPIRNWMQGIDLGAKVLRKSWEGNMEVKTRESPRARGAAKVDPKPEVRSSTPRRSFSNGKLPSKEVQAPTKSSKDEHKTQMSIKKATANGTLEEQEKSSKQRTSIGKKSAEVANHGLPGNLVKVSLNSRKVTDASVQWASLPSSISKIGREVMRHRDAAQIAANEAMQEAAAAESLLQCLSKYSELTNSAKEENPQPAVEQFLTLHASLNSTLMIAESLSKPIPDGSSPDYERSKLEEALKLKSERQKHASSWVQAALATNLSSFAVFTREPQSSKLPASSNSQNQKTLMGNQPMLVLHNSSSEDSSSKVPGKTRQPLYSKHASQGATRKPGDGSANRHKQLVQPPLPEWVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDIDGDNTLSDNGQIAGMLSQLKSVNDWLDEIGSSRDEEDEGESCQIPAETIDRLRKKIYEYLLTHVESAAAALSGGPQSSSTPIQTTQIKGKR* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4976 741 MobiDBLite consensus disorder prediction 126 170 - -
Lja3g4976 741 Pfam Plant protein of unknown function (DUF936) 4 721 IPR010341 -
Lja3g4976 741 MobiDBLite consensus disorder prediction 316 334 - -
Lja3g4976 741 Coils Coil 422 442 - -
Lja3g4976 741 PANTHER DUF936 FAMILY PROTEIN 1 740 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 720 741 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 291 315 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 564 614 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 135 149 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 564 589 - -
Lja3g4976 741 MobiDBLite consensus disorder prediction 721 741 - -
Lja3g4976 741 PANTHER EXPRESSED PROTEIN 1 740 IPR010341 -
Lja3g4976 741 MobiDBLite consensus disorder prediction 291 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4976 Lja-Chr3 91936683 91941570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4976 - - gmx:100814047 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4976 3 91936683 91941570 Lja3g4976 3 91936683 91941570 ECH
Lja3g4976 3 91936683 91941570 Lja3g0588 3 5775513 5779868 PCT