Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0588 ATGGCAAATCTTGTACCTGGGGTTCTTCTCAAGCTTATGCAGCACATGAACACTGATGTGAAAGTTGCCGGTGAGCACAGGTCATCACTGTTGCAAGTGGTGAGCATTGTTCCAGCACTTGCAGGTGGAGAACTGTTCTCAAATCAAGGCTTTTATCTCAAGGTTTCTGATTCCTCACACGCCACCTATGTCTCTCTCCCTGATGAACAGGATGATCTCATCCTGAGTGACAAGATTCAGCTAGGCCAGTTTGTGTTTGTTGATCGGTTGGAGGCGGCTTCGCCGGTTCCGATTCTTCATGGGGTTAGGCCTGTTCCTGGGAGACACGCTTGTGTTGGAACCCCTGAAGATATTGTTGCAACTCGCTCATTGGGATTCCTTAGTAATAATACTAATTCCCAAGTTAACAAGAACAGTGTTTTTTCTGGTAACAAGGACTTAGAGAGGTCAAAGTCTCCAAGGGTAGTGTTGGGGAATCATAAGGAGAAGAAGGAGAAAGTGAGATTGAATGGTGGTGGCGGTGCTCATGAAGAACCATTTGAAAAGAAATCTGTTGTTTTTGCTAAATGTAAATCTCAGACAAAAATAGCTGCACTTGATGACAATATTGATGTGAAGAAGGAACAACCTTTGACAAGATTAAGGTCCTTGAGTTCAAGGTCTAGTGTTCCTTCTTCGCCAACTAGTTGCTATTCGTTGTCTACTTCTTTTGAGAAATTTGGCAATGGGGTCAAGCAGCAGGGAAATGTTAAGGGATTGGAGAAGCTAACTGCTAAGGTGGGAGTGGTGGAGATAGGAAAGGGTGTCCGTGCGGCGAGTCCTATTGGGAAGAGAATTGCAATGGGAAACTCAATCAGAAATTTGGTTCAGGGCTTTGACTTTGGGGCTAAGGCTCTGCGTAGAAGCTGGGAAGGGAACATGGAAGTTAAGAGTAAAGAGACATCCAAATCAAGTGCTGCAAAGTTTGATCCTAGGCCTGAAGTTCGTAGTACGACTCCCAGGAAAAGTACTTCAAGTGAAAAGTTGTCCTCTAAAGAAGCACTGATGAAGTCCTCTAAGGAAGAGCACAAGACCCAAATATCTACAAAGAAAGTTGTTGCTGATGGAAATGTGGAAGAGCAAAATAAGTCAAGTAAGCCAAGAAAATCTATTGGAAAGAAATCATCAGAAGTTTCTAACTCTGGATTCCCTGGAGACTTGGTCAAGTTTTCTCCAAAAAGTAAAAAAGTGACTGATGCAAGTGTTCAGTGGGCTTCACTTCCTTCATCTATTGCAAAGCTTGGGAGGGAAGTAATGAAGCACAGAGATGCAGCGCAAATGGCAGCGACTGAGGCTATGCAAGAGGCTGCCGCTGCTGAGAGTTTGCTGCAGTGTCTAAGTGTATATGCAGAGCTAGGTAATTCTGCTAAGGACAATCACCCACAGCCTGCAACAATAGAGCAGTTTTTAACTCTTCATGCTAGCCTGAATGGTGCGCGGACGATTGCTGACTTGCTATCGAAAACCATTCCAGATGGTTCATCTCCAGATGTTGAAAGAAGCACCACAGAAGAAGCAGAAAAAATCAAATCAGAGAGACAAAAGCTTGCAGCTTCTTGGGTCCAGGCTGCTTTAGCCACCAATCTATCATCCTTTTCTGTTTTTAGCCGCGAACCTCTATCATCCAAGCTTCCAGTTTCAAGTAATTCTCAGAATCAAAAAAATGTCCTGGGAAGTAAACCAATTTTAGTCCTGGAAAATTCAAGTGAAGATGCTTCATCAAAATCTCATGGAAAAACCCGTCATGCGGCTCATTCTAAACATGGAACTCCTCGCAAAACGAGTGATGGATTAGCAAATGGGAACAAGCAGTTACTAGTCCAACCACCCCCACAATGGGTTAGAGGGAATGGCCTTGATGAAGTGGTTAATTTGGCTGACATGCTGCAATTGCGATCGCGAGACTGGTTTTTGTTATTTGTTGAGAAATTCCTGGACACTGATGGGGATAATACTGGTTTGTCAAACAATGGCCAAATAGCAGGCATGCTCAGTCAACTAAAAAGTGTAAATGATTGGTTGGATGAGATAGGTTCAAGCAAGAATGAGGGAGAATCGTGTCAGATACCGGCAGAGACGATTGACCAGCTCAGAAAGAAGATATATGAGTATCTTCTTACTCATGTTGAATCTGCTGCTGCTGCACTCAGTGGTGGATCACAGTCATTACCTCAGATTCAAACAACTGAGATTAAAGGCAAAAGGTGA 2247 0.4361 MANLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFSNQGFYLKVSDSSHATYVSLPDEQDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHACVGTPEDIVATRSLGFLSNNTNSQVNKNSVFSGNKDLERSKSPRVVLGNHKEKKEKVRLNGGGGAHEEPFEKKSVVFAKCKSQTKIAALDDNIDVKKEQPLTRLRSLSSRSSVPSSPTSCYSLSTSFEKFGNGVKQQGNVKGLEKLTAKVGVVEIGKGVRAASPIGKRIAMGNSIRNLVQGFDFGAKALRRSWEGNMEVKSKETSKSSAAKFDPRPEVRSTTPRKSTSSEKLSSKEALMKSSKEEHKTQISTKKVVADGNVEEQNKSSKPRKSIGKKSSEVSNSGFPGDLVKFSPKSKKVTDASVQWASLPSSIAKLGREVMKHRDAAQMAATEAMQEAAAAESLLQCLSVYAELGNSAKDNHPQPATIEQFLTLHASLNGARTIADLLSKTIPDGSSPDVERSTTEEAEKIKSERQKLAASWVQAALATNLSSFSVFSREPLSSKLPVSSNSQNQKNVLGSKPILVLENSSEDASSKSHGKTRHAAHSKHGTPRKTSDGLANGNKQLLVQPPPQWVRGNGLDEVVNLADMLQLRSRDWFLLFVEKFLDTDGDNTGLSNNGQIAGMLSQLKSVNDWLDEIGSSKNEGESCQIPAETIDQLRKKIYEYLLTHVESAAAALSGGSQSLPQIQTTEIKGKR* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0588 748 Pfam Plant protein of unknown function (DUF936) 4 729 IPR010341 -
Lja3g0588 748 MobiDBLite consensus disorder prediction 307 403 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 606 620 - -
Lja3g0588 748 PANTHER DUF936 FAMILY PROTEIN 1 747 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 504 523 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 331 345 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 346 362 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 307 330 - -
Lja3g0588 748 MobiDBLite consensus disorder prediction 580 624 - -
Lja3g0588 748 PANTHER EXPRESSED PROTEIN 1 747 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0588 Lja-Chr3 5775513 5779868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0588 - - gmx:100775984 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4976 3 91936683 91941570 Lja3g0588 3 5775513 5779868 PCT