Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4783 ATGGGGAATTGTGTGGTAAAGCACCCTATGACTAAAGATGATGATGATTCTGATCAAGAAGTGGAGTTTGCTTCTGCGAATGTGGAAGTTATTACTACCAAAGAATCTTGGGACCAAAAGTTGGAACAAGCAAGGAGAGATGGAAAAGTTGTTGTTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGCAAGACGATTGCACCTTGTTATTGCGAGTTATCAGAGAAATACCCATCTATTATGTTCTTAGTAGTGGATGTGGACGAATTAACTGACTTCAGCACTTCCTGGAACATCAAAGCTACACCAACGTTCTTCTTTCTTAGAGATGGACAAGAGATTGACAAATTAATAGGAGCCAACAAGCCAGAGCTGGAGAAGAAGATTGCTTCAGTTTCTTATTCAGTTCTGCACTCTCAATAG 423 0.4043 MGNCVVKHPMTKDDDDSDQEVEFASANVEVITTKESWDQKLEQARRDGKVVVANFSATWCGPCKTIAPCYCELSEKYPSIMFLVVDVDELTDFSTSWNIKATPTFFFLRDGQEIDKLIGANKPELEKKIASVSYSVLHSQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4783 140 PRINTS Thioredoxin family signature 51 59 - -
Lja3g4783 140 PRINTS Thioredoxin family signature 59 68 - -
Lja3g4783 140 PRINTS Thioredoxin family signature 98 109 - -
Lja3g4783 140 Pfam Thioredoxin 30 130 IPR013766 -
Lja3g4783 140 Gene3D Glutaredoxin 1 137 - -
Lja3g4783 140 PANTHER THIOREDOXIN 9 136 - -
Lja3g4783 140 SUPERFAMILY Thioredoxin-like 23 132 IPR036249 -
Lja3g4783 140 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Lja3g4783 140 CDD TRX_family 35 130 - -
Lja3g4783 140 PANTHER THIOREDOXIN H9 9 136 - -
Lja3g4783 140 ProSiteProfiles Thioredoxin domain profile. 10 134 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4783 Lja-Chr3 89863638 89866972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4783 K03671 - gmx:100527258 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3236 1 39958793 39964488 Lja3g4783 3 89863638 89866972 PCT