Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4778 ATGGCAATGTCAATGGCAATGGCATCACATTGCATGGCTCTGCCTCTGCCTCACCTTCATCTCCCTTTCTCTCCTCTCTCCGGCCACTGCCATTCCCACGTTGCGGCGAAGCCACCTCACCCTCTCTCCCTCATCAAACCCAAACCATCTCACCTTTGCTTCTCCGCCGGCGGAGGCGGCGGAGAAGGACCCGGAATCGGAGGCGGAGGCGGAGGCAGAGGAGATTCCGGGGATGGAAAATTCTGTGATGGTAATCATGATGGTGGAGCTGGATTTGGGGTTTTAGGGGTTTTGGTGAACGGTTGGAGATCTAGGGTTTCTGCAGATCCCCAATTCCCATTCAAGCTTTTGATGGAGGAGCTCGTCGGAGTCACCGCCTGCGTCGTCGGCGACATGGCGACACGGCCCAATTTCGGTCTCAACGAGCTGGATTTCGTTTTCTCAACTCTGGTTGTTGGGTCAATTCTCAATTTCACTCTCATGTATCTCTTGGCACCAACCATTTCCTCTGCTTCAACCATGCCTGCGATTTTCTCATCTTGCCCCAATAGCCACATGTTTGAACCGGGTGCTTACTCCATTGTGGAACGATTTGGAACGTTTGTGTATAAGGGTGCTGTGTTTGCTGGTGTTGGTTTTGCTACTGGTCTTGTTGGAACTGCAATTTCCAATGGGTTGATTTTGTTGAGGAAGAAGATGGATCCTGGGTTTGAGACACCGAATAAGCCGCCACCGCCGCTGCTGAATGCGCTTACTTGGGCTGCTCATATGGGTGTTAGTAGCAATCTTAGGTATCAGACTCTGAATGGTGCTGAGTTTGTGTTGGAGAAGAGTCTTTCTCCTTTGGTGTTTAAGTCCTCTGTTTTTGGTATTAGGCTTTTGAACAATGTGCTTGGAGGGATGACTTTTGTCATGTTGGCTAAGTTTACAGGGTCACAAAAGAGTGTTGGGGATGGGGATGAGGATCCTAGGGAGAAGGATACCAAAGAGGATTTTCTCAAGTGA 1005 0.5005 MAMSMAMASHCMALPLPHLHLPFSPLSGHCHSHVAAKPPHPLSLIKPKPSHLCFSAGGGGGEGPGIGGGGGGRGDSGDGKFCDGNHDGGAGFGVLGVLVNGWRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTISSASTMPAIFSSCPNSHMFEPGAYSIVERFGTFVYKGAVFAGVGFATGLVGTAISNGLILLRKKMDPGFETPNKPPPPLLNALTWAAHMGVSSNLRYQTLNGAEFVLEKSLSPLVFKSSVFGIRLLNNVLGGMTFVMLAKFTGSQKSVGDGDEDPREKDTKEDFLK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4778 334 MobiDBLite consensus disorder prediction 315 334 - -
Lja3g4778 334 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 56 322 - -
Lja3g4778 334 Pfam Protein RETICULATA-related 105 270 IPR021825 -
Lja3g4778 334 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 56 322 - -
Lja3g4778 334 MobiDBLite consensus disorder prediction 313 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4778 Lja-Chr3 89835450 89836798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4778 - - aprc:113849401 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3224 1 39848708 39850738 Lja3g4778 3 89835450 89836798 PCT