Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3224 ATGGCAACCACCGCTCTCCTTCGTTTTTCTCCTCTCTCTGGTCACTCTCATGCACTCTCTTTCCCATCATCATTACCATCACCCCAGACTCAGAATCGTTCTATATACCTCACCAACCCACCTCGTTTGCCTGAAAGATTGCAACTTTCCTTCGCCGGAGGTGACGGCGGTGATGGGGTTGGGCGTGGTGGAGGTGGTGGCGGTGGTGGTGGTGGTGATGAAAGTAAGAGTGATGGTGGAAGTGGAAATTCCAATGATTCATCTTTTGGGATTTTGGGTCTCTTTCTGAATGGATGGAGATCAAGGGTTGCTGCTGATCCACAATTTCCATTCAAGGTTTTGATGGAGGAGTTGGTAGGTGTGACTGCTTGTGTTCTTGGTGACATGGCTTCAAGGCCTAATTTTGGGTTGAATGAGCTTGACTTTGTTTTTTCAACTCTTGTTGTTGGTGCTATTCTCAATTTCACACTCATGTATCTTTTAGCACCTAGTCTAGGATCAGCTTCAGCTAAAGTTCCTTCAATTTTTGCCTCTTGTCCCAAGAGTCACATGTTTGAGCCTGGTGCTTACAGCCTTCTAGATAGGTTTGGGACTTTGGTGTACAAAGGAACCATTTTTGCTGTTGTTGGATTTGGTGCTGGACTAGTTGGAACCACACTTTCAAATGGGTTGATCAAGTTGAGGAAGAAGATGGATCCCACTTTTGAGAGCCCCAACAAGCCTCCACCTACTTTGTTGAATTCTCTCACTTGGGCTGGTCACATGGGTCTTAGCAGCAATCTCAGGTATCAAACTCTGAATGGTGCAGAGTTCATGTTGGAGAGAGTGCTGAACCCCTTTGCATTCAAGTCCTCTGTGTTGGTGTTAAGGTGTTTGAACAATGTTCTTGGTGGTGTGTCTTTTGTGGTGTTGGCAAGGCTAACAGGAGCACAGAGTGTTGGGGAAGAGAAGCCAACACCAGCATATGTGAAGGTTGGGTTAACTGACAAGGAGAAGGTGGAGGTTGAAAGGGAAAGGGAGAATCAGACAACAACACCATCAAAGTGA 1047 0.4623 MATTALLRFSPLSGHSHALSFPSSLPSPQTQNRSIYLTNPPRLPERLQLSFAGGDGGDGVGRGGGGGGGGGGDESKSDGGSGNSNDSSFGILGLFLNGWRSRVAADPQFPFKVLMEELVGVTACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPSLGSASAKVPSIFASCPKSHMFEPGAYSLLDRFGTLVYKGTIFAVVGFGAGLVGTTLSNGLIKLRKKMDPTFESPNKPPPTLLNSLTWAGHMGLSSNLRYQTLNGAEFMLERVLNPFAFKSSVLVLRCLNNVLGGVSFVVLARLTGAQSVGEEKPTPAYVKVGLTDKEKVEVERERENQTTTPSK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3224 348 Pfam Protein RETICULATA-related 102 268 IPR021825 -
Lja1g3224 348 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 47 325 - -
Lja1g3224 348 MobiDBLite consensus disorder prediction 16 38 - -
Lja1g3224 348 MobiDBLite consensus disorder prediction 16 84 - -
Lja1g3224 348 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 47 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3224 Lja-Chr1 39848708 39850738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3224 - - gmx:100815884 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3224 1 39848708 39850738 Lja3g4778 3 89835450 89836798 PCT