Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4769 ATGAAAGTAGGATCTAGTAAAGGGGGAAAAGTGTGTCTGATTGTGACAGGTATCCTGATTGCAATTGTATTGCTAATAGTGATTCTAGCTTTGACAGTGTTCAAAGCTAAACATCCCGTTACCACAGTAGACTCGATGAAGCTAGAGGATGTTGACGTGAAGTTGGATATAGCAAAACTAAGGGTAGATTTGAACGTGACCTTGGACGTGAATCTCTCGGTGAAGAACCCGAATAAGGTGGGATTCAAGTACTCAGACAGCACTGCTCAACTCAACTATAGAGGACAGCAGATAGGTGAAGTCCCTATACCTGCTGGAGAGATTTCTTCTGATCAGACCAAGGGATTCAACCTCACCCTCACCATTATGGCAGACCGTTTGCTCTCCAATTCCCAGCTTTTCTCTGATGTCACATCTGGTACATTGCCCCTGAACACTTTCTCCAGAATTTCTGGCAAAGTCAGCATCATGGGCTTTATCAAAGTGCATGTGGTTTCCTATACATCTTGTGATATTGCAGTTAATATTTCCAATAGAACAGTTGGGAACCAAGAGTGCCATTACAAGACAAAACTTTGA 579 0.4266 MKVGSSKGGKVCLIVTGILIAIVLLIVILALTVFKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRTVGNQECHYKTKL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4769 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 191 - -
Lja3g4769 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 191 - -
Lja3g4769 192 Pfam Late embryogenesis abundant protein 71 163 IPR004864 -
Lja3g4769 192 Gene3D - 27 176 - -
Lja3g4769 192 SUPERFAMILY LEA14-like 36 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4769 Lja-Chr3 89772491 89774923 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4769 - - gmx:100811806 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3211 1 39676749 39677330 Lja3g4769 3 89772491 89774923 PCT