Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4610 ATGGGTTGCACGGCGTCCAAGTTGGAAAACGAGGAAACCGTGCGCCGCTGCAAGGAGCGCTGCCGTCTTATGAGGGACGCCGTCTACGCGCGCTACCACCTCGCCACGGCGCACTCCGACTACTGCCGCTCCCTCCGCCTCACCGGCGACGCGCTCTGCACCTTCGCTGCCGGTGAGCCCCTCGCCGTCGCCGGCAACACCCCCGCCGTCTTCATCAACACAAACAACGTTCCACCACAACCACCTCCTCCTTCCTCCGCCGCCGCCGGCCAACCACGCGCCGTCTTGCTCAAAACTAAGAGCAATCCCACGCCGCCACGTCATCATCCTCCTCCTACCGCTGCCGTTCCTCGCCGTCGTCGTAATCCGCCGCCGAAGCTCCCTCACATCCTCTCCGAATCGAGCCTCTGTTCCACGCCGAGAAGCCAATCGTCGAGTTACTCGTTCTTCCCAACCGCGCAACAAGCTCCCTCCATAGCTTCGGAAACATCCTCAGTTTGGGATTGGGAAAATTTCTACCCTCCGCCGTCTCCGCCAGGCTCCGATTACTTCCGGCACCGTTCCGATCCTAAAACTCCCAAACCAGAAACGGCTCATTCCGAATCAGATTCAGCATACAACTTGTTCCACTCCAAATATCACCGTGAGAATCGCAAAATTGAGAACGCGAACATCGATTCTCGACAACACCGCGAGGGTTCCGAACACGATTTCTTCCCGGAACGCGAACCAGTTCGCACGCAGGGGGAGCCGGAGGAGGTTCTGTGCAGCGAGTGGGGCGACCGCGATAGCTTCTGCACGAACTCCTCATCCGATGAGGAGGAAGAAGAACGAGAAATCTCCGGTTCGGCGAGGGCGGAGCCGGTCTCCGGCGGTATTGCTCCGGCGGCGGAGAAGGAGAAGGTGGCGGTGAGGCATAGGGATTTGAAGGAGATTGTTGAGGCGGTTAAGGAGAATTTTGAGAAGGCTGCGGTCGCCGGAGATCAGTTATCGGATTTGCTCGAGATCGGCAGGGATCAACTTGATCGGAGTTTCAAGCAATTAAAGAAAACTGTGCACCACTCGAGTAGTTTACTGAGCAAACTGAACTCAAGGTGGACCTCAAAACCGCCATTGGTGGTTAAGTACCGGTTTGATACCGGTTCACTTGATAAACCGGGCGGTCCGATGAGTTTGTGCTCCACTTTGGACCGGCTTTTGGCATGGGAGAAGAAGCTCTATCTTGAAGTGAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAGAAGAAGTTATCAGCTTTGCAGAGCCAGGAATCCAAGGGGGGTGATGAAGCAAAGCTAGATGAAACAAAGACTTCCATAACAAGATTACAGTCACTAATTGTTGTCACGTCTCAGGCTGTGTCTACCACCTCAGCTGCCATTGATGGCCTTAGGGACTCTGATCTTGTTCCTCAACTTGTTGAGCTCTGTCATAGAATCATGTACATGTGGAGATCAATGCACCAGCACCATGAAACTCAAAGCAGCATTGTGAAGCAAGTCCGTGGCCTAGTGAACCGATCCTCCAAAAACCACTCAACATCCGAAACGCACAAGCAGGCAACTCGGGATCTTGAATCAGCTGTGTCATCTTGGCACTCCAGCTTCAATTGCCTCATAAAATTTCAACGGGACTTCATCCTTTCCCTCCATAGCTGGTTTAAGCTGAACCTTATTCCCATCAACAACAACTACATGGAACATCAACCATCTGATCAAGCATTTCGCTTCTTCGATGAATGGAAGCTTGCTCTTGACCATGTCCCCGACACGGTTTGTTCTGAAGCCATCAAAAGCTTCATCAACGTCGTACACGTGATCCATGTCAAGCAATGCGAAGAGCTCAAGATTAGAAAGAGAACTGAGACCGCTTCTAAGGCCCTTGAGAAGAAATCTTCGTCTCTGCGGGACATAGAGAGGAAGTTTTACAGCTCGTATTCCGCTGTAGGTGTTGTTGGCATTCCTGACTCTGTGCCTGATGATGGACAAGTGTTGGACGCGCGAGACCCGCTCGCGGAGAAAAAGATGGAGCTAGCAGGGTGCAAAAGGCAGGTTGAAGATGAAATGGTGAGGCACTCGAAGGCGGTTGAGGTGACAAGAGCTATGACACTCAACAATCTGCAGATGGGGTTGCCTGTAGTGTTTCAGGCATTGACAAGTTTTTCTTCCTTGTTCATTGAGGCTCTTGAGTCGGTGTGTAAACATTCATATGCAGTCAAGTAG 2244 0.525 MGCTASKLENEETVRRCKERCRLMRDAVYARYHLATAHSDYCRSLRLTGDALCTFAAGEPLAVAGNTPAVFINTNNVPPQPPPPSSAAAGQPRAVLLKTKSNPTPPRHHPPPTAAVPRRRRNPPPKLPHILSESSLCSTPRSQSSSYSFFPTAQQAPSIASETSSVWDWENFYPPPSPPGSDYFRHRSDPKTPKPETAHSESDSAYNLFHSKYHRENRKIENANIDSRQHREGSEHDFFPEREPVRTQGEPEEVLCSEWGDRDSFCTNSSSDEEEEEREISGSARAEPVSGGIAPAAEKEKVAVRHRDLKEIVEAVKENFEKAAVAGDQLSDLLEIGRDQLDRSFKQLKKTVHHSSSLLSKLNSRWTSKPPLVVKYRFDTGSLDKPGGPMSLCSTLDRLLAWEKKLYLEVKAREGVKIEHEKKLSALQSQESKGGDEAKLDETKTSITRLQSLIVVTSQAVSTTSAAIDGLRDSDLVPQLVELCHRIMYMWRSMHQHHETQSSIVKQVRGLVNRSSKNHSTSETHKQATRDLESAVSSWHSSFNCLIKFQRDFILSLHSWFKLNLIPINNNYMEHQPSDQAFRFFDEWKLALDHVPDTVCSEAIKSFINVVHVIHVKQCEELKIRKRTETASKALEKKSSSLRDIERKFYSSYSAVGVVGIPDSVPDDGQVLDARDPLAEKKMELAGCKRQVEDEMVRHSKAVEVTRAMTLNNLQMGLPVVFQALTSFSSLFIEALESVCKHSYAVK* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4610 747 MobiDBLite consensus disorder prediction 178 206 - -
Lja3g4610 747 PANTHER UNCHARACTERIZED 148 747 - -
Lja3g4610 747 PANTHER UNCHARACTERIZED 1 149 - -
Lja3g4610 747 MobiDBLite consensus disorder prediction 104 121 - -
Lja3g4610 747 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lja3g4610 747 MobiDBLite consensus disorder prediction 222 299 - -
Lja3g4610 747 MobiDBLite consensus disorder prediction 184 198 - -
Lja3g4610 747 MobiDBLite consensus disorder prediction 132 148 - -
Lja3g4610 747 Pfam Protein of unknown function (DUF632) 309 612 IPR006867 -
Lja3g4610 747 MobiDBLite consensus disorder prediction 222 259 - -
Lja3g4610 747 MobiDBLite consensus disorder prediction 98 148 - -
Lja3g4610 747 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 149 - -
Lja3g4610 747 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 148 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4610 Lja-Chr3 88031731 88037688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4610 1 86 Acyl Lipid Metabolism Gene Families AT2G27090 29.703 3.35e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4610 - - gmx:100792843 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4610 3 88031731 88037688 Lja3g4610 3 88031731 88037688 ECH
Lja3g4610 3 88031731 88037688 Lja1g2922 1 35386952 35393307 PCT