Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2922 ATGGGTTGCTCGGCGTCCAAGCTGGAAAACGAGGACACGGTGAGGCGGTGCAAGGACCGGCGCCGTCTCATGAAAGAGGCCGTCCACGCGCGCCACCACCTCGCCGCCGCGCACTCCGACTACTGCCGCTCCCTCCGCCTCACCGGCTCCGCACTCACCACATTCGCCGCCGGTGAACCCCTCTCCGTCGCCGACAACACCCCCGCCGTCTTCATCAACCCCCAAAAAGCAACATACCACCCCCCACACACACAAACTCAAACACCACCGCCACCGTCTCCGTCACCGCCACCGTCCGTTTACACTCCTCAGCCGCCTCGTTTCGACCCTTCACCCTCCCCCACCATTTCCACCTCCAAGCTCCCTCACATCCTCTCCGACTCCACCCCCACCAACCACAACCGCCGCCGTAAACCGCCGCCGAAGCTCCCCCACATCCTCTCTGAGTCTAGCCCGTCCTCCACCCCTCGAAGCCAAGCTTCCACCAATAACTTTGCTTCCAATTTCTTCCCCACCGCACACTCCAACTACTCCTCCACCCCTTCCCAAACCTCCTCCGTTTGGAACTGGGAAAATTTCTACCCACCGCCGCCTCCACCGCCTGGCTCCGATTACTACGACAGAGAACACGAAGATCCTGCTCCTGATGCAGCTTCCCAATTCTCTTACAAATCCCGAAACAGCAGAAAAAGTGAGAGTGCCTTTTCTTCTTACTCCCAGCAACAACAACAAAAACAGCAACATCATCAGCATCAGAATCAGCATCGAAACCCCACCCCACAACGTGATATCGATGGATTTGAGTCTGAGAGATCGGAATATGATTATTTCAATGAGAAATTTGCGACGGTGCAGAAGCATAAGCATCTGGGTCATGATGATGATCATCATCTTGCGGAGGAGTACACTGAGACTGAGAGAGAAGAGGTTGAGTGTAGTGAATGGGGTGAGCATTACAGCACAACGAGCTCATCTGAAGATGGTGATGATGAGGAGGATGATGATGATGATGGGGTGGAAGGGGATGTGGAATCCAGGATGGGGAGGACACGGTCGAATTTTGGGTTGGAGTCAATGGCGGCGGCGCCCAAGAAGGGGAAATCGGAGGATGTGGCGTCGTCCTCGTCGGTGAGGACCGGGTCGGGTGTGATGGAGATGAAGATGGTGGTGAGGCACAAGGACTTGAGGGAGATTGTGGAAGCGATTAAGGAGAATTTTGATAAGGCTGCTGTGGCTGGGGATCAGGTTTCGGAGATGCTTGAGATCAGCAGGGCTCAGCTTGATCGCAGTTTCAGGCAATTGAGAAAAACTGTGTATCACTCAAATAGCTTATTGAGCAACCTGAGTTCGAGTTGGACCTCCAAACCGCCATTGGCGGTTAAGTACCGGCTCGATGCCGCTTCCCTGGATGAACCGGGCGGTCTGAAGAGTCTTTGCTCCACTTTGGAACGCCTTTTGGCTTGGGAGAAGAAGCTCTATGAGGAGGTTAAGACAAGAGAAGGTGTGAAGATTGAACGTGAAAAGAAATTGTCAGTTTTGCAAAATCAGGAATACAAAGGAGAGGATGAAGCAAAGATATTCAAAACTAAGACGTCCATAAATAGGCTGCAGTCACTAATCACTGTGACATCTCAGGCTGTGTCCACCACCTCAACTGCAATTATTGGGCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATCATGTACATGTGGAGATCAATGCACCAGTATCATGAAATCCAAAGCCACATAGTGCAGCAAGTCCGCGGTCTGGTGAACCGAACATCAAGAGGTCACTCAACTTCTGAACTGCACCGGCAGGCAACTCGGGACCTTGAATCGGCTGTGTCGGCATGGCACTCCAGTTTCTGCCGCCTTATAAAATTCCAGCGGGACTTCGTCCTGTCCTTACATGGCTGGTTTAAGCTCAGCCTTGTCCCCGTCGATACCGACAACAACATCCACAACAGCAGGGAAGCCTCTGATGCATACATGTTTTTTGATGAATGGAAGCTCGCGCTTGATCGTGTCCCGGACACGGTTGCCTCCGAAGCCATAAAGAGCTTCATTAATGTCATCCATGTGATATCTTCCAAGCAAGCTGAAGAGCTCAAGATCAAGAAACGAACCGAGACCGCATCCAAGGAACTCGATAAAAAGGCCTCATCGGTGCGGAACTTAGAGAGGAAGTTTTACCACTCGTATTCCATGGTAGGCATTAGCCTTCCTGACACTGCCCCTGACAATGGACAGGGCTTGGACGCGCGCGACCCGCTGGCCGAGAAGAAACTCGAGCTCGCGACATGCCAGAGACGCGTCGAAGATGAGATGCTGAGGCATTCCAAAGCTGCGGAGGTAACAAGAGCCATGACACTCAACAATCTGCAAACAGGGTTACCTGGGGTTTTTCAGGCACTGACCAGTTTTTCTTCCTTGTTCACTGAGGCTATTGGGTCAGTGTGCACTCGTTCTTATGCCATCAAGTAG 2505 0.5246 MGCSASKLENEDTVRRCKDRRRLMKEAVHARHHLAAAHSDYCRSLRLTGSALTTFAAGEPLSVADNTPAVFINPQKATYHPPHTQTQTPPPPSPSPPPSVYTPQPPRFDPSPSPTISTSKLPHILSDSTPTNHNRRRKPPPKLPHILSESSPSSTPRSQASTNNFASNFFPTAHSNYSSTPSQTSSVWNWENFYPPPPPPPGSDYYDREHEDPAPDAASQFSYKSRNSRKSESAFSSYSQQQQQKQQHHQHQNQHRNPTPQRDIDGFESERSEYDYFNEKFATVQKHKHLGHDDDHHLAEEYTETEREEVECSEWGEHYSTTSSSEDGDDEEDDDDDGVEGDVESRMGRTRSNFGLESMAAAPKKGKSEDVASSSSVRTGSGVMEMKMVVRHKDLREIVEAIKENFDKAAVAGDQVSEMLEISRAQLDRSFRQLRKTVYHSNSLLSNLSSSWTSKPPLAVKYRLDAASLDEPGGLKSLCSTLERLLAWEKKLYEEVKTREGVKIEREKKLSVLQNQEYKGEDEAKIFKTKTSINRLQSLITVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGIMYMWRSMHQYHEIQSHIVQQVRGLVNRTSRGHSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFVLSLHGWFKLSLVPVDTDNNIHNSREASDAYMFFDEWKLALDRVPDTVASEAIKSFINVIHVISSKQAEELKIKKRTETASKELDKKASSVRNLERKFYHSYSMVGISLPDTAPDNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAAEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEAIGSVCTRSYAIK* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2922 834 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lja1g2922 834 MobiDBLite consensus disorder prediction 84 112 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 220 255 - -
Lja1g2922 834 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 834 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 286 315 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 286 379 - -
Lja1g2922 834 PANTHER UNCHARACTERIZED 1 834 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 74 272 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 256 272 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 147 191 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 326 341 - -
Lja1g2922 834 MobiDBLite consensus disorder prediction 113 129 - -
Lja1g2922 834 Pfam Protein of unknown function (DUF632) 395 700 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2922 Lja-Chr1 35386952 35393307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2922 480 647 Acyl Lipid Metabolism Gene Families AT2G27090 36.686 2.19e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2922 - - gmx:100815888 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2922 1 35386952 35393307 Lja1g2922 1 35386952 35393307 ECH
Lja3g4610 3 88031731 88037688 Lja1g2922 1 35386952 35393307 PCT