Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4513 ATGGCACCAGTTACCGTTGCCACCACCCCCAACACCACCCGTTCAGATCTCACTGAATTTGTGATGCTCAAAGGGAATGGAGTGAAGGGTCTCTCTGAAATGGGGCTAAAGAGCCTCCCCGTGCAATACATCCAACCATTGGAAGAAAGAACATGCATGATCCAAGTTGTTCCTCAAGAGTCCATTCCCATCATTGACATGTCCAATTGGGATGACCCAAAAGTGGGAGATGCAATTTGTGAAGCAGCTCAGAAGTGGGGATTCTTCCAAATCATCAACCATGGGGTTCCACTCCAAGTGCTGGAGAATGTGAAGGATGCAACTTATAGGTTCTATGAGCTGCCAGCTGAACAGAAACTGAAGTACACAAAGGAGAACTCTCCATCAAAAGATGTGAGGTATGGTTCCAGCTTTAGCCCTGAAGCTGAGAAGGCATTAGAGTGGAAAGATTATCTCAGTCTCTTCTTTGTTTCTGAAGCTGAGGCTGTAGCAACATGGCCACCTGCATGCAGGGATGAAGCACTCGAATACATGAAGAGATCTGAAACTGTAATCAAACAGCTTTTAACTGTGTTGATGAAGGGACTAAATGTGAAGGAAATTGATGAGACAAATGAGTCACTTTTGATGGGTTCAAAGAGGATCAATCTTAACTACTATCCTGTTTGCCCTAACCATGACCTAACAGTGGCAATAGGGCGCCATTCAGATGTATCAACCCTAACTATTCTCCTACAGGACCAAACCGGGGGCCTTTATGTTCGAGCGGCGGACAGCCAAGGCTGGATCCATGTGCCGCCTATCTCAGGTGCCTTAGTGATCAACATAGGTGATGCATTGCAAATTATGAGTAACGGAAGGTACAAGAGCATTGAGCACCGAGTGACGGCGAATGGAAGCAAGGTTAGGGTTTCAGTGCCAATTTTTGTGAATCCTAGACCCATAGATGTCATTGGTCCATTGCCTCAAGTCCTTGCTGGTGGGGAGAAGGCCATGTATAAGAATGTGTTGTACTCAGATTATGTGAGGTATTTCTTCAAGAAAGCTCATGATGGGAAGGCGACCATTGAACATGCTAAGATATGA 1086 0.4567 MAPVTVATTPNTTRSDLTEFVMLKGNGVKGLSEMGLKSLPVQYIQPLEERTCMIQVVPQESIPIIDMSNWDDPKVGDAICEAAQKWGFFQIINHGVPLQVLENVKDATYRFYELPAEQKLKYTKENSPSKDVRYGSSFSPEAEKALEWKDYLSLFFVSEAEAVATWPPACRDEALEYMKRSETVIKQLLTVLMKGLNVKEIDETNESLLMGSKRINLNYYPVCPNHDLTVAIGRHSDVSTLTILLQDQTGGLYVRAADSQGWIHVPPISGALVINIGDALQIMSNGRYKSIEHRVTANGSKVRVSVPIFVNPRPIDVIGPLPQVLAGGEKAMYKNVLYSDYVRYFFKKAHDGKATIEHAKI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4513 361 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 15 353 - -
Lja3g4513 361 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 15 353 - -
Lja3g4513 361 SUPERFAMILY Clavaminate synthase-like 27 352 - -
Lja3g4513 361 Pfam 2OG-Fe(II) oxygenase superfamily 217 312 IPR044861 -
Lja3g4513 361 Gene3D - 17 344 IPR027443 -
Lja3g4513 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 312 IPR005123 -
Lja3g4513 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 155 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4513 Lja-Chr3 86944894 86947749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4513 27 361 Glycosyltransferase AT5G59530 35.632 6.49e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4513 K06892 K23378 gmx:100527581 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3807 3 74988773 74994211 Lja3g4513 3 86944894 86947749 ECH
Lja3g4513 3 86944894 86947749 Lja3g4513 3 86944894 86947749 ECH