Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4404 ATGGGCTGTTTTGATGAGGGGCAGCATTTCAATGGTGAACTTGAAAATGGAGTGAGTGTTGGATGTGGTGGTGAGGAAGAGGCAGATAAAGCTGCCATTGAGGATGCTGTGAAGGTCCTCTTGTTGGGTCTTGGAGAAGATATCAACAGGGAAGGTATTAGAAAGACACCACTTCGTGTTGCCAAGGCTCTCCGTGAAGGAACCAGAGGTTACAGACAAAAAGTGAAGGACATAGTTGAAGGTGCTTTATTCCCTGAAGCTGGTCTAGAAAATAATAAAATTGGTCATGCAGGGGGAGCAGGTGGACTTGTGATTGTTCGAGATCTTGACCTTTATTCCTACTGTGAGTCATGCTTGCTTCCATTCCAGATAAAATGCCATGTGGGTTATGTTCCTTCTGGCCAAAGAGTTGTCGGCTTAAGCAAGCTTTCTCGAGTGGCTGATGTATTTGCGAAACGACTCCAAGAGCCGCAGCGTCTCGCAGATGAGGTGTGTTCCGCTCTGCAACAGGGAATAAAGCCAGCAGGCGTTGCTGTTATACTTCAGTGTACACATATCCACTTCCCAGATATAGAATCAATCTTTCTTGAATCAAACCAGAAAGGTGTGATGATACTTGTTTCGTCCGGTTCTGGGGTTTTCGAAAACAAAAATGCAGATTCATGGGCAGATTTCTTCTTCCTTCTTAAATCTAGAGGCATTGACATGGACCAAATTCACCATAGAGGAACGCCTGACCAATACTGGTGTCCGTCTTTGTCTTTGTCTTCTCTTTCTGCTAAAGTTTCCTCCAAAATTGGACCAGTCAATCCTGCAATGGTCAATGCAGTATCTTCAATCCTTAAATCTTTGGGAGAAGATCCAACAAGGAAGGAGCTTGCAGGGACTCCTAGTCGTTTCGTGAAATGGCTGTCGACCTTCCAAAGCATTGACATGGATGTCAAGCTTAATGGTTCCCTTTGTGGTGGTGGTGTGATAGATTCTGTGAACTCCAATGGAGAGGTAAAGTTGAGTGAAAAACAGATATACTCTGAGGTGAACCTGCCATTTTGGTCACAGTGTGAGCATCACATACTTCCATTTCATGGTGTTGTTCACATAGGATACTTCCTTTCAGAAGGTTTCAATCCTATTGGGAAATCACTTTTACAGTCAATAGTGCATTTTTATGGTTTCAAGCTCCAAGTGCAGGAAAGGCTTACAAGGCAGATAGCAGAAACCCTTTCGCCACTGTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCAAGCCATACATGTATGATCTCTAGGGGAATTGAAAAGTTTGGCAGCAGTACAGCCACCATTGCTGTGTTGGGACGCTTTTTGTCCGACAATGCTGCCAGGGCTGCTTTCTTGCAGAGGATTGCAAGTGCTACATCTTCTGGAGAGCAGTGA 1416 0.4442 MGCFDEGQHFNGELENGVSVGCGGEEEADKAAIEDAVKVLLLGLGEDINREGIRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLENNKIGHAGGAGGLVIVRDLDLYSYCESCLLPFQIKCHVGYVPSGQRVVGLSKLSRVADVFAKRLQEPQRLADEVCSALQQGIKPAGVAVILQCTHIHFPDIESIFLESNQKGVMILVSSGSGVFENKNADSWADFFFLLKSRGIDMDQIHHRGTPDQYWCPSLSLSSLSAKVSSKIGPVNPAMVNAVSSILKSLGEDPTRKELAGTPSRFVKWLSTFQSIDMDVKLNGSLCGGGVIDSVNSNGEVKLSEKQIYSEVNLPFWSQCEHHILPFHGVVHIGYFLSEGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETLSPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFLSDNAARAAFLQRIASATSSGEQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4404 471 PANTHER GTP CYCLOHYDROLASE I 1 1 468 - -
Lja3g4404 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 264 462 - -
Lja3g4404 471 Pfam GTP cyclohydrolase I 275 462 IPR020602 -
Lja3g4404 471 Pfam GTP cyclohydrolase I 33 186 IPR020602 -
Lja3g4404 471 Gene3D - 333 465 IPR043133 -
Lja3g4404 471 Gene3D - 269 315 IPR043134 -
Lja3g4404 471 Gene3D - 24 78 IPR043134 -
Lja3g4404 471 Gene3D - 97 232 IPR043133 -
Lja3g4404 471 PANTHER GTP CYCLOHYDROLASE I 1 468 IPR001474 GO:0003934|GO:0046654
Lja3g4404 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 9 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4404 Lja-Chr3 85333906 85337720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4404 K01495 - gmx:100780537 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2059 1 23831431 23836921 Lja3g4404 3 85333906 85337720 PCT