Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2059 ATGGGATGTTTGGATGATGGGAGTTTCACTGTTAAACTTGAAAATGGAGCTACGAATGGTTTTGCTGAACTGAGTGTGGAGGAAGAGGGGAATAATGCCACCATTGAAGATGCTGTGAAGGTTTTGTTGCTGGGTCTTGGGGAAGACATAAACAGGGAAGGTCTAAGAAAGACACCTCTTCGTGTTGCTAAGGCCCTTCGTGAAGGAACCAGAGGTTACAAACTAAAGGTGAAAGACATTGTTCAAGGCGCTTTATTCCCTGAAGCTGGTCTAGATAATAGTGTTGGACATGCGGGCGGAGCAGGTGGACTTGTGATTGTCAGAGATCTTGACTTGTTTTCCTATTGCGAGTCCTGCTTGCTTCCGTTCCAGGTCAAGTGTCATGTAGGTTATGTTCCTTCCGGTGGAAGAGTTGTTGGTTTAAGCAAGCTCTCTCGCGTTGCTGAAGTATTTGCAAAACGGCTCCAAGAACCTCAGCGTCTTGCGGATGAGGTGTGTTCTGCTTTGCATCTGGGAATAAAGCCAGCAGGTGTTGCTATCATACTTCAATGTACACATATCCACTTTCCAGACATAGAATCAGCTTTTCTTGACTCGAACTACCAAGGATGGGTGAAGATACTTGTTTCCTCAGGTTCTGGGGTTTTCGAAAACAAAAACACAGATGTATGGGCTGATTTCTTTAGTCTTCTTAAATTTAGAGGTATCAATGTGGAAAATTTTCATTTTAGAGGACCATCTGACCCGTGCTGGTGTCCTTCTGAGTCTTCTCTTTCCGCCAAATCCAAAATTCAACCAGCCAATCCTGTAATGGTCTCTGCAATAGCTTCAATTATTAAATATTTGGGAGAAGATCCATTGAGGAAGGAGCTTACAGGAACCCCAAGGAGATTTGTGAAATGGTTAATGAACTTTCAAAACAGTAACTTGGATATGAAGCTGAATGGTTTTCTTTGTAGATTCTGTAAATGTCAATAA 978 0.4264 MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTRGYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAIILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVENFHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFVKWLMNFQNSNLDMKLNGFLCRFCKCQ* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2059 325 Gene3D - 260 310 IPR043134 -
Lja1g2059 325 Gene3D - 24 80 IPR043134 -
Lja1g2059 325 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 261 321 - -
Lja1g2059 325 Pfam GTP cyclohydrolase I 35 187 IPR020602 -
Lja1g2059 325 PANTHER GTP CYCLOHYDROLASE I 1 320 IPR001474 GO:0003934|GO:0046654
Lja1g2059 325 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 24 232 - -
Lja1g2059 325 PANTHER GTP CYCLOHYDROLASE I 1 1 320 - -
Lja1g2059 325 Gene3D - 97 234 IPR043133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2059 Lja-Chr1 23831431 23836921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2059 K01495 - gmx:100783814 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2059 1 23831431 23836921 Lja3g4404 3 85333906 85337720 PCT