Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4377 ATGGCGGGATTTGCTAGAAGGAAACGAGTCACTGATCTTTTCGACGACGAGGCCAGAGCTCGTCTCTTCGGCGGCGATCACCGCCAGCTCAGCGGCGTCAGCAGCGGAAGCGAACATTCCGGCGACGGAGACTCACCTTGCCTGTCCGAGCTCGTGCATGGTTTTCTGGAGGACAACAGCGGGGATGACTGTGACTGTGACAGTGACATTCCGGTGATGAACGAGTTTGACTCGGAGCGAGTCGACTCGGTCGCCGAGAGGGCTGACTCGGTGGAGGATCTGCTGAGGCTAAATGCAGCGAGCACCACCGTGGAGGACGGTTACAAGAATCTGCTTCAACAGCACGTTTCGGAGGCGGTGGTGAAATTCTCGTTTGTGAGGGAGATGAGCGATTCCCTGTTCCGGCGGAACGTGATGTCGTTTCTTCGGGAGAACGGGCACAATGCGGCGATCTGCAAGACGCGGTGGGAATCCTCCGGCGGCGGGATCACCGCCGGCAACTACGAGTTCATCGACGTGGTGCGATCTGGTCCGTCCACGTGGCAGAGCCGGTACTTCGTGGACGTTGATTTCGCCGGACAGTTCGAGATCGCCCGGCCGACGAGTCGTTACTCGGAGATTCTGAGCTTCGTTCCCGGAGTTTTCGTCGGAACCGCGGAGGAGGTGAAACGCACCGTTTCGGTGCTGTGTGGTGCCGCGAAACGGTGTTTTAAAAGCAGAGGGCGTAACCTTCCTCCGTGGAGGAAGAACCGGTATATGCAGAACAAGTGGTTCGGGCCTTATCGGAGAACTGTGAACCCGGTTCAAGGAAACCCGGTTCAAAAGCAGAGGGCTCACCCGGCCTTCAGTGACGCTATGTGTAGATTTGTGGGGTTCGACGACGCCGTTTCGGAGGTGACTAAGCGTGGCGCTGTTTTTGTCCGTACGAGATGA 933 0.5788 MAGFARRKRVTDLFDDEARARLFGGDHRQLSGVSSGSEHSGDGDSPCLSELVHGFLEDNSGDDCDCDSDIPVMNEFDSERVDSVAERADSVEDLLRLNAASTTVEDGYKNLLQQHVSEAVVKFSFVREMSDSLFRRNVMSFLRENGHNAAICKTRWESSGGGITAGNYEFIDVVRSGPSTWQSRYFVDVDFAGQFEIARPTSRYSEILSFVPGVFVGTAEEVKRTVSVLCGAAKRCFKSRGRNLPPWRKNRYMQNKWFGPYRRTVNPVQGNPVQKQRAHPAFSDAMCRFVGFDDAVSEVTKRGAVFVRTR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4377 310 Pfam PDDEXK-like family of unknown function 49 263 IPR006502 -
Lja3g4377 310 PANTHER DUF506 FAMILY PROTEIN 2 310 - -
Lja3g4377 310 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 135 264 IPR006502 -
Lja3g4377 310 PANTHER OS03G0796600 PROTEIN 2 310 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4377 Lja-Chr3 85044376 85045678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4377 - - lja:Lj0g3v0213419.1 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2048 1 23734566 23735729 Lja3g4377 3 85044376 85045678 PCT