Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2048 ATGGCAGCTTTTCCCAGAACAAACCAACCCACTCACTCATTCGCTCGACTCGTCGGAACCGACCACCGGAAACTCACCTCCGCCAGCGACGACGACTCCTCCCTATCCCTCTCCGATCTCGTGCATAGCTTCCTCGAACAACCCACCGATGACTCGCTGGGTAGCGACTCGGTCGACGAATCTGCCAACTCGTCGGAGAACAACACACAAAGGTGGAGGACTGCAATTACTCTTGCACTCGCGAACAATGCGGATCCATACAGGAACACGCTCCACGCGCACGTTTCAGAGGCAACGGAGAGGTTTGAGTTTCTGAGGGAAATGCGAAACGTTTCGGCTTTCCGTCGAAGCGTGGCGGCGTTTCTGAAAGAAAACGGTCACGACGCGGCGGTGTGTAGAACCGCGTGGGAGTCTGGCAGTGGTGTAACCGCCGGGAGCTACGAGTTCATCGACGTGGCGCGATCGGGATCGCGGTACTTCGTGGACCTTGATTTTCGCGCGCAGTTCGAGATTGCGCGGCCGTCAGGGGAATTCTTGGAGGTGCTGAGCGCCGTCCCCGTCGTGTTTGTTGGCGGAGCGCCGGATGTGAAACGCGTCGTTTTGACTGTGTGCGACGCGGCGAGGAGGTGTTTCAGGAGTAGAGGGCTTTCGGTTCCGCCGTGGAGGAAAAACCGGTTCATGCAGAATAAGTGGTTTGCCCCGTGCCGGAGAACAGTGAACCCGGTTCATGGGAACCCGGTTCGGGCAGCACCTATAAGGGTAACTGCAGTTAACGGTGTTAGTTGCAGGTTAGTTGGGTTCGATGACGTTGTGTTGGAGGCAAGACGCGGCGGCGGCGGCGGCGTTGTCCGCACGAGATGA 861 0.5807 MAAFPRTNQPTHSFARLVGTDHRKLTSASDDDSSLSLSDLVHSFLEQPTDDSLGSDSVDESANSSENNTQRWRTAITLALANNADPYRNTLHAHVSEATERFEFLREMRNVSAFRRSVAAFLKENGHDAAVCRTAWESGSGVTAGSYEFIDVARSGSRYFVDLDFRAQFEIARPSGEFLEVLSAVPVVFVGGAPDVKRVVLTVCDAARRCFRSRGLSVPPWRKNRFMQNKWFAPCRRTVNPVHGNPVRAAPIRVTAVNGVSCRLVGFDDVVLEARRGGGGGVVRTR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2048 286 Pfam PDDEXK-like family of unknown function 38 237 IPR006502 -
Lja1g2048 286 PANTHER OS03G0796600 PROTEIN 13 286 IPR006502 -
Lja1g2048 286 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 115 238 IPR006502 -
Lja1g2048 286 PANTHER DUF506 FAMILY PROTEIN 13 286 - -
Lja1g2048 286 MobiDBLite consensus disorder prediction 49 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2048 Lja-Chr1 23734566 23735729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2048 - - gmx:100814756 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2048 1 23734566 23735729 Lja3g4377 3 85044376 85045678 PCT