Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3720 ATGAGAATTCTCATTCTGCTTTCTCTCGCAACCCTTCTCCTCTTCTCCTCTCACGTTTTCTGCGAAGAGGAAGAAGATCTCAGCTTCCTCGACGAACCCGACACCTCCTCCTCCCTCCACCACCACGATGACGACGGCGGCGATTTCGGCGACGACGCCGATCTCGACGACTTCTCCGGCTACGAGGATGCTTACAAACAGCCTGAGATTGACGACAAGGACGTCGTCGTTTTGAAGGATAAGAATTTCAGCGATGTGGTTAAGAACAACCGTTATGTCATGGTGGAGTTTTACGCGCCGTGGTGCGGTCACTGTCAGGCTTTAGCGCCGGAGTATGCTGCCGCCGCCACTGAGCTGAAGGGTGAGAATGTCATTTTGGCTAAGGTTGATGCCACGGAGGAGAGCGAGTTGGCTCAGGAGTACGACATTCAGGGTTTTCCTACGCTCTACTTCTTCGTCGATGGCATTCACAAGCCTTATAATGGACAAAGGAACAAAGAAGCTATATTGACCTGGATTAAGAAGAAGACAGGACCTGGCATACACAACATAACTTCATTGGAGGATGCTGAGCGCATCTTGACCTCCGAAAGTAAACTTGTTGTGGGGTTTATCAATTCTTTAGTGGGTCCTGAGAGCGAGGAGCTTGCTGCTGCTTCAAGACTTGAGGATGATGTCAATTTTTATCAAACTGTGAATCCTGATGTGGCTAAGCTTTTCCATATTGACCCTAATGTTAAACGCCCGGCTTTGATCCTGATCAAGAAAGAAGAGGAAAAGCTGAACCATTTTGGTGGCCAATTTGTAAAGTCTGAAATAGCAGACTTTGTCTCATCCAACAAGCTTCCTCTGGTAACCATTTTTACAAGAGAAAGTGCACCAGCAGTCTTTGAAAATCCAATCAAGAAACAGTTGTTGCTGTTTGCAACTTCAACTGACTCAGAAAAAATCCTCCCATTGTTTCAAGAAGCAGCAAAGTTTTTCAAGAAAAAGTTGATCTTTGTATATGTGGAGACGGATAATGAAGATGTTGGGAAGCCTGTATCAGATTACTTTGGTGTCAGTGGGAGTGATCCACAGGTACTTGCATATACTGGAAATGATGATGGAAAAAAATTTATCCTTGATGGAGAGGTGACTGTTGACAAAATTAAGACATTTGGGGAAGATTTCCTCGAAGACAAGCTAAAACCATTTTTCAAGTCAGATCCGATTCCTGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGGAATAATTTTGATGAAATTGTCTTGGATGAGTCAAAAGATGTTCTCCTTGAGATTTATGCTCCCTGGTGTGGCCATTGTCAATCATTGGAACCAATATACAACAAACTTGCAAAACATCTTCGTGGTATTGAGTCTCTTGTCATAGCCAAGATGGATGGTACAACAAATGAACATCACAGGGCAAAGTCTGATGGATACCCAACTCTTCTATTCTTCCCAGCAGGAAACAAGAGTTTTGATCCTATTACTGTTGACACAGATCGCACGGTGGTAGCTTTTTACAAGTTCCTCAAGAAACATGCTTCAATTCCATTCAAGCTCCAGAAACCAGCCTCAACTTCTGAATCCGAGAATTCTGCTGCTAAAGGGAGCTCTGATGCCAAAGAGAGCCAGAGTAGCAATAGCGATGTGAAGGATGAATTGTGA 1680 0.4393 MRILILLSLATLLLFSSHVFCEEEEDLSFLDEPDTSSSLHHHDDDGGDFGDDADLDDFSGYEDAYKQPEIDDKDVVVLKDKNFSDVVKNNRYVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEESELAQEYDIQGFPTLYFFVDGIHKPYNGQRNKEAILTWIKKKTGPGIHNITSLEDAERILTSESKLVVGFINSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALILIKKEEEKLNHFGGQFVKSEIADFVSSNKLPLVTIFTRESAPAVFENPIKKQLLLFATSTDSEKILPLFQEAAKFFKKKLIFVYVETDNEDVGKPVSDYFGVSGSDPQVLAYTGNDDGKKFILDGEVTVDKIKTFGEDFLEDKLKPFFKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPIYNKLAKHLRGIESLVIAKMDGTTNEHHRAKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPASTSESENSAAKGSSDAKESQSSNSDVKDEL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3720 559 Gene3D Glutaredoxin 282 406 - -
Lja3g3720 559 ProSitePatterns Thioredoxin family active site. 94 112 IPR017937 -
Lja3g3720 559 CDD PDI_b'_family 302 392 - -
Lja3g3720 559 CDD PDI_b_family 181 280 - -
Lja3g3720 559 Pfam Thioredoxin 413 498 IPR013766 -
Lja3g3720 559 Pfam Thioredoxin 75 175 IPR013766 -
Lja3g3720 559 PANTHER PROTEIN DISULFIDE ISOMERASE 48 538 - -
Lja3g3720 559 SUPERFAMILY Thioredoxin-like 408 520 IPR036249 -
Lja3g3720 559 PRINTS Thioredoxin family signature 93 101 - -
Lja3g3720 559 PRINTS Thioredoxin family signature 142 153 - -
Lja3g3720 559 PRINTS Thioredoxin family signature 101 110 - -
Lja3g3720 559 MobiDBLite consensus disorder prediction 526 549 - -
Lja3g3720 559 Pfam Thioredoxin-like domain 216 387 - -
Lja3g3720 559 MobiDBLite consensus disorder prediction 526 559 - -
Lja3g3720 559 Gene3D Glutaredoxin 178 281 - -
Lja3g3720 559 ProSiteProfiles Thioredoxin domain profile. 391 520 IPR013766 -
Lja3g3720 559 CDD PDI_a_PDI_a'_C 413 515 - -
Lja3g3720 559 SUPERFAMILY Thioredoxin-like 184 292 IPR036249 -
Lja3g3720 559 SUPERFAMILY Thioredoxin-like 280 410 IPR036249 -
Lja3g3720 559 CDD PDI_a_family 76 173 - -
Lja3g3720 559 TIGRFAM ER_PDI_fam: protein disulfide isomerase 73 559 IPR005792 GO:0003756
Lja3g3720 559 Gene3D Glutaredoxin 407 521 - -
Lja3g3720 559 SUPERFAMILY Thioredoxin-like 68 178 IPR036249 -
Lja3g3720 559 ProSiteProfiles Thioredoxin domain profile. 49 178 IPR013766 -
Lja3g3720 559 ProSitePatterns Thioredoxin family active site. 433 451 IPR017937 -
Lja3g3720 559 PANTHER PROTEIN DISULFIDE-ISOMERASE 48 538 - -
Lja3g3720 559 TIGRFAM pdi_dom: protein disulfide-isomerase domain 78 176 IPR005788 GO:0003756
Lja3g3720 559 Gene3D Glutaredoxin 62 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3720 Lja-Chr3 73667647 73671610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3720 K09580 - gmx:100170706 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3720 3 73667647 73671610 Lja3g0835 3 8454000 8459207 PCT