Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0835 ATGCAAACTCATAAACAACTCGTCGTTTCACTCTCCCTCATCACTCTCCTTCTCCTTCTCCTCTCCTCCTTCTCCCTCCCTCTCTCCGCCAAACCCCCCCAAAACGACGACTTCGACGATGAAGATCTCAGCTTCCTCGAGGAACCCGAAGCCGAAGACACCACCACCGCTTCCCTCCACGACCACGGCAACTTCCCGGATCCCGACCCTTTCGGCGACGGCGACAGCGAAGACGGCGAGGATTTCGACGACGACTTCTCCGGCTTCGAGCCTCCCTCTGAGGAGGCGTACGAGGAGCCCGCGGTGGATGACAAAGACGTCGTCGTTCTGATTGAGCGGAACTTCACCACTGTCGTCGAGAACAACCGGTTTGTCATGGTGGAGTTTTACGCTCCATGGTGCGGTCACTGTCAGTCTCTCGCGCCGGAGTACGCAGCCGCCGCCACTGAACTGAAGAACGACGGTGTCGTTTTAGCTAAGGTGGATGCCACGCAGGAGAATGATTTGGCTCACGAGTACGATGTTCAGGGCTTCCCTACAGTGTCGTTCTTCATTGATGGGGTTCATAAGCCTTACACTGGCCAAAGAACCAAAGATGCTATAGTGACATGGATTAGGAAGAAGATAGGACCTGGTGTATACAACATAACTACGTTGGATGATGCTGAGCGCATATTAACCTCTGAAAGTAAAGTTGTTTTGGGCTTCCTTGACTCTTTAGTTGGTGCTGACAGTGATGAGCTAGCTGCAGCATCAAAACTTGAGGATGATGTCAATTTTTATCAAACTGTGATTCCTAATGTGGCTAAGCTTTTCCATATTGATACAAATGTTAAACGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTGAACTATTTTGATGGTCAATTTGTAAAAGCTTCTATAGCTGATTTTGTGTCCTCCAACAAGCTTCCGTTGGTTACAACTTTTACAAGGGAAAGTGCCCCATCAATTTTTGAAAGTCAAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAGCGATACAGAGAAGTTCCTTCCAGTATTTAGAGACGCAGCGAAGGTGTTGAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTATCACTGGGAATGCTCCCAAAGTAGTTGCTTTCGCAGGAAACAATGATGGCAGTAAATTTTTGTATGATGGAGAGGTCACTGTTGACAAAATTAAGGCATTTGGGGAAGATTTTCTTGAAGACAAGCTAAAACCTTTCCTCAAGTCAGATCCAGTTCCTGAAACTAATGATGGTGATGTGAAAATAGTTGTTGGGAATAACTTCGATGATATTGTCTTGGATGAGTCAAAGGATGTTCTTCTTGAGATTTATGCTCCCTGGTGTGGCCACTGCCAAGCTCTGGAACCGACATACAACAAGCTTGCAAAACATCTTCACGACATTGAGTCTATTGTAATAGCCAAGATGGACGGAACAACAAATGAGCATCCAAGGGCAAAGGCTGAGGGGTTCCCCACTATCCTCTTCTTCCCAGCAGGAAGCAAGAGTTCTGACCCGATTGCTGTTGATGTGGATCGTACAGTGGTGGGCTTTTATAAGTTCCTGAAGAAACATGCATCAATCCCATTCCAGCTCCAGAAACCAACCTCAACTTCTAAAACTGAGAGCAAGAGTTCAGATGTCAAGGAGAGTCAGAGTAGCAGCACTGACACGAAGGATGAGTTGTGA 1764 0.466 MQTHKQLVVSLSLITLLLLLLSSFSLPLSAKPPQNDDFDDEDLSFLEEPEAEDTTTASLHDHGNFPDPDPFGDGDSEDGEDFDDDFSGFEPPSEEAYEEPAVDDKDVVVLIERNFTTVVENNRFVMVEFYAPWCGHCQSLAPEYAAAATELKNDGVVLAKVDATQENDLAHEYDVQGFPTVSFFIDGVHKPYTGQRTKDAIVTWIRKKIGPGVYNITTLDDAERILTSESKVVLGFLDSLVGADSDELAAASKLEDDVNFYQTVIPNVAKLFHIDTNVKRPALVLLKKEEEKLNYFDGQFVKASIADFVSSNKLPLVTTFTRESAPSIFESQIKKQLLLFVTSSDTEKFLPVFRDAAKVLKGKLIFVHVEMDNEDVGKPVADYFGITGNAPKVVAFAGNNDGSKFLYDGEVTVDKIKAFGEDFLEDKLKPFLKSDPVPETNDGDVKIVVGNNFDDIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLHDIESIVIAKMDGTTNEHPRAKAEGFPTILFFPAGSKSSDPIAVDVDRTVVGFYKFLKKHASIPFQLQKPTSTSKTESKSSDVKESQSSSTDTKDEL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0835 587 CDD PDI_b_family 213 312 - -
Lja3g0835 587 MobiDBLite consensus disorder prediction 71 101 - -
Lja3g0835 587 TIGRFAM ER_PDI_fam: protein disulfide isomerase 105 587 IPR005792 GO:0003756
Lja3g0835 587 TIGRFAM pdi_dom: protein disulfide-isomerase domain 111 208 IPR005788 GO:0003756
Lja3g0835 587 CDD PDI_b'_family 324 424 - -
Lja3g0835 587 MobiDBLite consensus disorder prediction 558 587 - -
Lja3g0835 587 ProSitePatterns Thioredoxin family active site. 465 483 IPR017937 -
Lja3g0835 587 PRINTS Thioredoxin family signature 133 142 - -
Lja3g0835 587 PRINTS Thioredoxin family signature 125 133 - -
Lja3g0835 587 PRINTS Thioredoxin family signature 174 185 - -
Lja3g0835 587 SUPERFAMILY Thioredoxin-like 441 552 IPR036249 -
Lja3g0835 587 ProSiteProfiles Thioredoxin domain profile. 423 552 IPR013766 -
Lja3g0835 587 ProSiteProfiles Thioredoxin domain profile. 85 210 IPR013766 -
Lja3g0835 587 MobiDBLite consensus disorder prediction 568 587 - -
Lja3g0835 587 Gene3D Glutaredoxin 439 553 - -
Lja3g0835 587 Gene3D Glutaredoxin 210 313 - -
Lja3g0835 587 MobiDBLite consensus disorder prediction 33 101 - -
Lja3g0835 587 CDD PDI_a_PDI_a'_C 445 547 - -
Lja3g0835 587 Pfam Thioredoxin 107 207 IPR013766 -
Lja3g0835 587 Pfam Thioredoxin 445 530 IPR013766 -
Lja3g0835 587 CDD PDI_a_family 108 205 - -
Lja3g0835 587 SUPERFAMILY Thioredoxin-like 100 210 IPR036249 -
Lja3g0835 587 PANTHER PROTEIN DISULFIDE ISOMERASE 4 579 - -
Lja3g0835 587 ProSitePatterns Thioredoxin family active site. 126 144 IPR017937 -
Lja3g0835 587 SUPERFAMILY Thioredoxin-like 312 442 IPR036249 -
Lja3g0835 587 Gene3D Glutaredoxin 94 209 - -
Lja3g0835 587 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 579 - -
Lja3g0835 587 Pfam Thioredoxin-like domain 248 419 - -
Lja3g0835 587 Gene3D Glutaredoxin 314 438 - -
Lja3g0835 587 SUPERFAMILY Thioredoxin-like 213 324 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0835 Lja-Chr3 8454000 8459207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0835 K09580 - gmx:100790223 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0835 3 8454000 8459207 Lja3g0835 3 8454000 8459207 ECH
Lja3g3720 3 73667647 73671610 Lja3g0835 3 8454000 8459207 PCT