Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3712 ATGAGTTCACCGGAGACGCGGCGGAACCACTCCATTACGTCATCCAGTTCCACCACCTCCGACGACGGACCTAGTCCTCCGATCATATTCCACTTGCCGCACCTCTCATTGAGCCTCTTCGACGGCGAGCATCAAGAGCCCAACGGATCTTCCCTCCGACCCTCCTCCGAGCCGTCGAGCCCTAGCACCACCGCCACGAGCACCGTTCGCCATGAAATTGAGGAGATGACGATCCATGATTCCGCCGGAGCCTCCAGCTTCCCTGAGAAAAAACCACATCACGATGATGATGAGGACGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTCTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGATACGGAGATGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAGAATGGAGGTGATCGTGTCAAATTCGTGAGGGCTGGAAAGCATCAGGTTGTTTTTCTTGTCAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAGCCTTATGAGTCATTAAGGGGGCAGTTGGATCTTATTTATGGTCAGATTATTGTAATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATTCAAAGTTTGATATGTCACCCTTGCTTGGTGGAACAGATATTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAATCCAGCCACATTTCTTCATGCCTATACTTGTCTACCTCTTGCGTATGGGACAAGGCAAGCTGCTGGTGCTATCTTGCAAGATGTTGCAGATTCAGGTGTTCTGTTTGCAGTACTGATGTGCAGACACAAGGTAATTAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCTGATGATATGCTGCTGTTGTCCAACTTTGTCATGTCATCAGAATCCTTTAGGACATCAGAAGCATTTTCTCCTGTTTGCTTGCCAAGATACAATCCTTTGGCATTTTTGTACGCTTATATCCACTATTTTGATGACAACACATACCTGATGTTGTTGACGACTAGTTCTGAGGCATTTTACCATCTTAAGGATTGCAGGATTCGTATCGAAACGGTCCTTTTGAAGTCAAATATACTTCGTGAAGTTCAGACATCCTTGTTAGAAGGTGGGATGCGTGTTGAGGATCTGCCACCCTTACCTCGTTCTGGATCATCTTCTCATTTGGGCCAGCATAGGCTTCAATCAGATTCTCCTGAAATATTGAGGGAATCAAATTCTGGCATTGGTGGTGCTGCTGGGTTGTGGCATTTCATATATCGCAGCATATATCTGGATCAATATGTTTCTTCAGAGTTCTCACCGCCTATTAACACTCCTCAGCAGCAGAAAAGATTGTATAGAGCGTATCAGAAACTTTTTGTATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTATGTTCTGCTCTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCGTTTGATCCCCTTGCAGATAAGGCCTTGGCAATAAAGACTTGCAACCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGTTAGCCCCTTTTCATGGTGA 1629 0.4426 MSSPETRRNHSITSSSSTTSDDGPSPPIIFHLPHLSLSLFDGEHQEPNGSSLRPSSEPSSPSTTATSTVRHEIEEMTIHDSAGASSFPEKKPHHDDDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKFVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLDLIYGQIIVILTKSVNRCFEKNSKFDMSPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYGTRQAAGAILQDVADSGVLFAVLMCRHKVISLVGAQKASLHPDDMLLLSNFVMSSESFRTSEAFSPVCLPRYNPLAFLYAYIHYFDDNTYLMLLTTSSEAFYHLKDCRIRIETVLLKSNILREVQTSLLEGGMRVEDLPPLPRSGSSSHLGQHRLQSDSPEILRESNSGIGGAAGLWHFIYRSIYLDQYVSSEFSPPINTPQQQKRLYRAYQKLFVSMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGVSPFSW* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3712 542 MobiDBLite consensus disorder prediction 1 24 - -
Lja3g3712 542 Pfam Third Longin domain of FUZ, MON1 and HPS1 428 528 IPR043970 GO:0016192
Lja3g3712 542 MobiDBLite consensus disorder prediction 86 101 - -
Lja3g3712 542 MobiDBLite consensus disorder prediction 1 101 - -
Lja3g3712 542 Pfam First Longin domain of FUZ, MON1 and HPS1 110 230 IPR043972 GO:0016192
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 242 263 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 162 176 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 507 520 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 185 213 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 315 338 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 343 369 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 128 148 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 266 279 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 290 306 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 110 127 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 491 505 IPR004353 GO:0006623
Lja3g3712 542 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 520 540 IPR004353 GO:0006623
Lja3g3712 542 PANTHER BNAC04G15860D PROTEIN 67 542 - -
Lja3g3712 542 Pfam Second Longin domain of FUZ, MON1 and HPS1 271 362 IPR043971 GO:0016192
Lja3g3712 542 MobiDBLite consensus disorder prediction 43 71 - -
Lja3g3712 542 PANTHER SAND PROTEIN-RELATED 67 542 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3712 Lja-Chr3 73568317 73573372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3712 K20195 - gmx:100816794 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3712 3 73568317 73573372 Lja3g0840 3 8526433 8532232 PCT