Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3709 ATGTTTTGGAAGCTCGCTTCTATTTCGGCTTCTTCGCCTGTGGAAGCAATATTAGATAGGGAGAATTTCACTTTAGAAGAGCTTCTGGATGAAGAAGAAGTAATCCAAGAATGCAAGGCCCTAAACAGTCGTCTCATCAACTTTCTGAGAGATCCAGTTCAGGTTGAACAATTATTGCGCTATATTATTGAAGAACCACCAGAAGATGCTGAAAGTAAACGGGCCTTCAAGTTTCCATTTATTGCTTGTGAGATTTTCACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAGGAGCTGATGAACTTATTATTCTCCTATTTGGAGCCTGATCGTTCACACAGTGCCTTGCTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCCTCATGATTCGAAAGACTGTACCGCTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGTCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGACTAGTAGGTGCTGATGACCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAAAGCAACCTGCTTGAGATGATTGTTGATAAATTAAGTCCATCATGTGCTCCTGAAGTTCATGCCAATGCAGCTGAAACATTATGTACAATAACTCGTAATGCCTCATCTACCCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCCCAAATTTTGGGTCATGCATTGGAAGATTCACAATCGAAGTCCAGCCTTGTAAACTCACTTTCAGTGTGTATTTCTTTGCTGGATCCGAAAAGATCTGCTATATCATCTCCCCTATTTCATTCATTCCGAAGTCAACACATGTATGAGCCACCAATTCCTGTAAACCCAGATACTATTGGTGCAATGCTCCCCAAACTTAGTGAATTGCTAATGCTATTGAATGTATCATCTGATGAAAAACTATTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGGAAGCATAGATTGAAGATTGTCGAGTTCATTGCGGTTCTTTTAAAAACTGGAAATGAAGCAGCAGAAAAAGAAATGGTGGACTCAGGAACCATTCAACGAGTTATTAATCTTTTCTTTGAGTATCCATACAATAATTCATTACACCATCATGTAGAAAGTATAATATTATCGTGCCTGGAGAGCAAAACTGATGCTATTGTTAATCATCTTCTTCGAGACTGCGATTTAATTGGAAGAATTCTCCAAGCAGATAAACAATCTAGTCTCTCTCCTGACAGAGATCTGCCAACAGTACCTGCTGCTGGGAAAAAGGCACCACGGGCAGGAAACATTGGGCATATTACCCGAATTTCTAACAAACTTGTTCACTTGGCATATAATCGCAGTCACATACTGACATGTCTTCAGGAAAATAATGAGTGGAATGAGTGGCAAACTACAACTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGCGGACGTCCGACTGCTTTACAAGATAGGATGAGGGACAGTGATGATGATGACCTTCATGACAGGGACTATGATGTTGCAGCTTTAGCCAATAATTTGAGTCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAACGAAGAGGAACGTGGCAGCCTTGATCGAGATGATGAGGATGTCTACTTTGATGACGACTCTGCTCAAGTTGTCATATCATCTCTAAGACTTAGTGATGATCAAGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGACGGCAGAGTTGGTGATGCAGCTGGGGGCACAACATCATCAGAGATGATGGATGAGATAAACTTGAACGGTGCTGCAAATAGTGGTAGCAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAACTGGATGAAAGCAAAAATACTCTGAACGGTACATCTAGCTCGAACACAGACTTTATCAGTGGATCAACAGACAGCAATTCCATGAATGGAGGCGCTATGAACTTTGAAAGCGAAAACACAAGTGCTTCACATGATACTGGATTCTTCAGGTTTGAGGCATCAGACAAGGAAGGGTCGTATGGTGATAGACCCATGCCTGATTGGGTGGGATGGGGGGAACCTTCAGATATGCAAGTTGGTAACTCAAGCACGAATCCCTTTGTAGATCATGATGAGTCTGGAAATAACCTTTCTAGTAAACCTGAATTAGGTAGCCCTAATCCTAGTTCTCCTTCAAACGGGGAAACTGTTTCTTCAAATGGGTTGCCATCTACTATAGATTCCATGGAGGGGATTGTGGAGTCAAGTCAAAGATCAGGAGCAGTACCCTCGCTGTTTGAGGAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGCACTGAGAAGGCTATGGATCAGGCTCTGAAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAAGAAACATGGTCCCTAAAGTGGCAGAAAAGGAAAATTCCGAAGAGGGCGGTGCCGGAGTGAAGGAATTCAATGATACTAACTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTAGAGTGA 2559 0.4181 MFWKLASISASSPVEAILDRENFTLEELLDEEEVIQECKALNSRLINFLRDPVQVEQLLRYIIEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSYLEPDRSHSALLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSPSCAPEVHANAAETLCTITRNASSTLAIKLSSPSFVAQILGHALEDSQSKSSLVNSLSVCISLLDPKRSAISSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLSELLMLLNVSSDEKLLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEAAEKEMVDSGTIQRVINLFFEYPYNNSLHHHVESIILSCLESKTDAIVNHLLRDCDLIGRILQADKQSSLSPDRDLPTVPAAGKKAPRAGNIGHITRISNKLVHLAYNRSHILTCLQENNEWNEWQTTTLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGSLDRDDEDVYFDDDSAQVVISSLRLSDDQGSSLFTNSNWFAFQDGRVGDAAGGTTSSEMMDEINLNGAANSGSSSDDEVVVGEDEELDESKNTLNGTSSSNTDFISGSTDSNSMNGGAMNFESENTSASHDTGFFRFEASDKEGSYGDRPMPDWVGWGEPSDMQVGNSSTNPFVDHDESGNNLSSKPELGSPNPSSPSNGETVSSNGLPSTIDSMEGIVESSQRSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGGAGVKEFNDTNYWRVDQEVAVLE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3709 852 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 850 - -
Lja3g3709 852 MobiDBLite consensus disorder prediction 687 778 - -
Lja3g3709 852 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 850 IPR007587 GO:0019903|GO:0043666
Lja3g3709 852 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Lja3g3709 852 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Lja3g3709 852 MobiDBLite consensus disorder prediction 612 675 - -
Lja3g3709 852 MobiDBLite consensus disorder prediction 639 675 - -
Lja3g3709 852 MobiDBLite consensus disorder prediction 709 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3709 Lja-Chr3 73518125 73528242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3709 K15501 - gmx:100777597 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3709 3 73518125 73528242 Lja3g0845 3 8587636 8596167 PCT