Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3701 ATGGAGAGAGAACTAGAGATGAAGTTATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGCTACAAGGATGCTGCTATTGAGCTTGGAAAGGAATTGGTATCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACAATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAAACACTTATGCCAAGAGAGCTTACTGGAGAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGAGCTCCTTGAAGTGATAACATGGGCTCAACTTGGAATTCATGATAAACCGGTGGGATTGCTGAATGTAGATGGATACTACAATTCCCTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAACACCAAAAGAGCTTGTAAAAAAGATGGAGGAATATTTCCCAGTACATGAAAGAGTTGCCTCCAAGCTAAGTTGGGAAAATGGGCATCAAGATTAG 630 0.4349 MERELEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYNGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTARHIIVSAPTPKELVKKMEEYFPVHERVASKLSWENGHQD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3701 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lja3g3701 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Lja3g3701 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 206 - -
Lja3g3701 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 206 - -
Lja3g3701 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Lja3g3701 209 Gene3D - 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3701 Lja-Chr3 73375008 73381475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3701 K22522 - gmx:100811156 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3701 3 73375008 73381475 Lja3g0851 3 8635955 8641108 PCT