Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0851 ATGTACTTGCATGAATTGTCAAGGTTCAAGAAGAGTCAAAAACAGAGGAAACAGGGGATGATGGTGGAGAAGGAAGAGTGTGAGAGAAAAGAGATGAAGGGAGAAACTGAGATGAAACAATCAAGGTTCAAGAGGATTTGTGTGTTCTGTGGAAGCAGTCCTGGGAACAAGAGCAGCTATAAGGAAGCTGCTATTGAGCTTGGAATGGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGCTTGGTTTCTCAGGCTGTTTATGATGGAGGTCGCCATGTAATTGGAGTTATTCCCAGAACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGAGAAGTAAAAGCAGTAGCAGACATGCATCAAAGAAAAGCAGAAATGGCTAGACAATCTGATGCCTTCATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAGCTTCTTGAGGTGATAACTTGGGCTCAGCTTGGCATCCATGATAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGTTTCATTAGCCCCCAAGCTCGCCACATAATTGTATCTGCCCCTTCAACAAAAGAGCTTGTAAAAAAGATGGAGGAATATATCCCACAACATGAAAGAGTTGCCTCCAAACTAAGCTGGGAAAATGAGCAGCTAGATTACTCCTCAAATTATGATATCTCAAGGTGA 750 0.436 MYLHELSRFKKSQKQRKQGMMVEKEECERKEMKGETEMKQSRFKRICVFCGSSPGNKSSYKEAAIELGMELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPRTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPQARHIIVSAPSTKELVKKMEEYIPQHERVASKLSWENEQLDYSSNYDISR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0851 249 Pfam Possible lysine decarboxylase 88 218 IPR031100 -
Lja3g0851 249 Gene3D - 32 220 - -
Lja3g0851 249 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 32 249 - -
Lja3g0851 249 PANTHER LOG FAMILY PROTEIN YJL055W 32 249 - -
Lja3g0851 249 SUPERFAMILY MCP/YpsA-like 42 221 - -
Lja3g0851 249 TIGRFAM TIGR00730: TIGR00730 family protein 44 221 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0851 Lja-Chr3 8635955 8641108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0851 K22522 - gmx:100815735 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0851 3 8635955 8641108 Lja3g0851 3 8635955 8641108 ECH
Lja3g3701 3 73375008 73381475 Lja3g0851 3 8635955 8641108 PCT