Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3694 ATGGGAAATGGTACTCGTTCTAGTCAAAGGGCTAAGGATGGTGAAAATTATAACGAGAGGATGAAACAGGATAGTGAGAAAGGAAAAATCAGCCCAAGTCCTACTGAATCAGATACAACGGGTGTCAGAAGGTCTGCTAGAGAGACACCATCAAAGAAGATAATTCCAAGCTCTTCAAGTGCTCGGAAATCTGAGCGACTTGAGAAGGGAACACCGCCATCTCCAGCAGTAAGTAAGAAGTCTGAAAGGGTCGAAAAAAAGAATATGCCAAGTCCTTTGAGGAGATCTGGAAGAGCTAGGGGTCAGTCTTCCACTCCTTCTGATTCTAAAAGCTCAGGGTCGTTGAATTCAAAGCAGAAACAGAAGAGTGTAAAACAGGTTACACTAGAAGCTAAGGAAGTCAATCAAAGTGAGGAACATGACCCGGAAACTTTGCAGGTGAAAGTAAAGAGAATGGACGCCCGTATGTATCGGTCTCTCTTTAAAAAACCGAAGGAAGGTTCATCAGTACCATCTAACACCCCAACTAATGAGACTTGTATGGTACCTGAAAGTGTTCAGCCTAATTTCTCAGGAGAGGAGACATTACAGATGTCAATGTCGAATTCCATATTAGATGGTGAGTTAGTGAGGAATGGTCATGATGGGGGTGAAATGTCAATACTGTCCAAGAGAAAGGGAATGACGGTGGACATGGATTCAGATCCTTCTGCCTCACTATCTAAGGATGACAACTGCAATTTTATTCCTAATGCTAGTCCTTCGATGTCAGATGGCAATGTTATCGGGACTGATGGGCCATATTCCAAACGAGTAAGGTTGGATTATAATCCTAAAGTTAATGAGTCATGTAATCCTTCTGCAACTGAGACCACTAAGCTTATGAAATATGGGGATTATTACCTTGAATTAGAAGATGCTACACTCTATAGGTCTGCTGAAAACATTGTAGGAAACATAAATATTCCGGCTCTTCTTGATAGTCAAAGTAATAATGAAAAATATGGTTTAAATCCTAATTCCGATGACAGCGCTTTTCAACTGAAAGACAGGTTGTCAAGTGACATTGCATCCAGATGCAAGTCTGACTCCTGTAGGTTTGTTGAGTATTGGGTTCCTGTACAGATATCCGATGTGCAGCTTGAGCAGTATTGTGCTATTTTACTTAAAAATGCAGAAATCCTTCGGTCATCATCAAAGGTTGATAGTGTTGGCGCCATCCGTGATATCCTGATATCAATCCGCAAGTGTTGTAATCATCCCTATGTTGTTGATGAACACCTACAACGTCTGCTTTGGGAGGGCCTTAAACCAGATGAGTTTCTGGGTGTTGATATCAAAGCAAGCGGCAAGCTGCAACTTCTTGATTCAATGCTCATGGAGTTGAAGAAAAAGGATTTAAGGACACTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGAGATTTAATAGGTGATATTTTGGATGACTTTCTGCGACAAAGATTTGGACCAGATTCTTATGAAAGGATAGATAAAAGTCTTCCACCATCCAAGAAACTAGCTGCTATGAAGAAATTTAATGACAAGAACAATGAACGATTTTTCTTTTTGTTGGAAACATGCGCGTGCCTTCCAAGCATCAAATTGTCATCAGTTGATACTATTATTATATTTGATAGTGATTGGAACCCAGTGAATGATATTAGATCCCTTCAGAAGATAACACTTGACTCACAGTATAAATTGATAAAAATGTTCCGTCTATATTCAGCTTTCACTGTTGAAGAAAGAGCTTTAAGCTTTGCTAAGCAGGATAAGACACTTGATATCAATTTACAAAACATGAACCGGGGTATTAGTCATATGCTGTTGATGTGGAGCGCGCCTTGTCTATTTGATGAGTTGAAAGTTTTCCATGATGATGCAGCTTCTACGCCAAGTCTGAAATCCTTGTTTGGCCAACCACTTTTAAAACAAGCAATTGATGAATTCCGATCTGTTCTATCTCAAGATGGTGAAGATACAGATGCAAACAACTGTTCAATTTTATTGAAAGTCAAAGTCCAGCAAAAAGAGTTAACATACCGTGGACATTTTTCTTTGCTTGGTGAGCTGAAAATTGGGTTATTGGATGAAGAGGCACCCCAAATTTTCTGGCCAAAACTTTTGGAGGGTAAACATTTCTGTTGGAAGTACTCATCTAATTTATTTCAGCGGAGCCGGAAGAAAGTCCATTATTTTAATGGTTCAGTTGATCGGCCTGATGCTGTGACTGAAGGCATACTAAAGAAGCGCAAGAAAGTGAGCAGCAATGTTGTTGATCATCCTTCTTCGAAATCTGAAGATGAAAATTTATCCAATGGAATCAAGGAAGGTGCATCCGGGGATCTAGTGGATAGACCACATGTTAATGTTGTTGAATCTGAGAAAAAGGGTACAGTGCACGGTGAGCAGAGGAGCTCACATCTTTTGCTGAAGCCAGAGATAACAAAGCTCTGTGAAGTTCTTCTTCTCCCAGATACGGTCAAGAGCATGGTTGATAATTTTCTTCAATATGTCATGAACAATCACCATATCACTAGGGAATCAGTGCCATTATTACAGGCTTTTCAATTATCTCTGTGTTGGACTGCTGCTGCTTTGTTAAAGTACAAACTTGGTCACAAGGCTTCTCTTATTCGTGCAAAACAACAACTGAATTTTGAGTGCAAGAAAGAAGAGGTGGATTTAATATATTCTTTGTTGCGGTGTCTAAAGAAGATATTTTTATACCGTACAGGAAATTGTAATGATACTGGTTCTCCAAAAGCTTCTGAATCATCAAATACGGTTTATTCCTATACAGGAGTGGAACAAGAGGTTGAATTGTTCAAAATAGATATGTCCAAAAGCATTAAAGAAATTAAGAAGAAGTTTGAAAAGCCCCTAAAGAAGCTATGCCTTTTGCATCAGGAAGAGAAACAAAAGTTGAAAGCAGTTTTTGAGAGCGAAAAGGCTTACGTTGAGCGAAAGTTCTTAACAGAGAGCGCTATTATTCGATCCTGCTCTCCCAATGATGTGATGAGAACAGAAAAGGTCAAAGTTTTGAATATTGCATATGAAGAAAAAATTGCAGAATTGAAATATCAGCATGAAACAGATCTTAAGGCTCTTGAGGACGTACAGTTAGCTCAGATGCAGGAGCTTCAGGATAAGGAGGCCGCTTGGGTGGAAGATGTGAAATGTTGGGGACAAAATGAATTGTTAAACATTGTTGCTTCAAAGGAACTTGGGACTGGGGTTGAGTACTTGCAGACTTGTGATCAAGGACAGCCTCAAAATGGCCCAAAGAATCATTTTTCTGAAGGAAAGGGTCATTCCCAGTCCAGAGAACAGAAATCTGATGGTGCACCAAGCATGATAAATGAAGGTAATGGGTATGAAAATTTCAGCCATGAACCTCGAGGCAGTTTTAGGGATGACTCTGTAGGATTGTCTCTGCCTTCACTGAATGGAGTGGTATGTGATCGGGAAACATCAGGTGTTCCTGGTGAAGAAGTGTCTGGTTTCAGTGCTGGCATGTCACAATCACCTGAAAAACATATGCCTAGTTTAGATGCCACATGTTTGCCAGTTTGTGAGAATGAGGTTCCAATTCATGTGGCTGATGACTGCAATGGTTCAAAAAGTAATGTCCCTCTGAATTCATCTTTGTCGGATGAAAGAATTGGTGGCAGTGCCGTAATAAGTGTCTTAGATAGAGAGGCACATATAACTGTCAGTAGTACTGATTGTCCCGAAAATGTTTTTGCTGTTGTTAATCCTCCTTCATCCATGGAGCAAATAACTGATGGAGATGCTGTAAATGAGTTTTCAGATAAAGAGTTGTCAAGGACATGTGGAACTACTAGTCCAACTAATGTTGCAGATGATATAGAACGCCAAAATTCTGATGGAGGATCGTTAAATGTCCAGGTTTTAGATGGTGTTATAGCGTCAACGCCTAGTCAAGCTGCTGGTTCAAGCGATGGTCCAGTTACAATTTCCCTTTCGAATCCACCTTTGGAGGAACAAATTCCTGGTGGAGGTATTCCAGTGTCAGAAAGTAGTCATAATGATATAGAGGCTTTAACGAATGCTCTACTGGTGGATAAAAGTACCATGTCTGACCAGGAGGAAGGAGGGCCTAGAACTGTGGGAGAATTCACCTTGTCCCAGGAGAGACTAGTATCTAGATCAGTAAATGGCATGGAGCCTCTTGGACAAGGGCAGGAATTATCATCAGTAGGGACCCCTCCTGACCTGGATACAGCTGGGGAATTGTGGAATTCTTCTGAACAAGTATCTAATTCAGGTCATTTTGTACCAGCCAATCAACCCAATCATGTTTCACCGATCATGATACCTTCAGAGAAGGTCCATCAATTACCAGCTGCTGAGCTCCCTTCCAACATGGATCCATCTTATTTTCCTGTAGCAACTGAAGATGCACATCAGCCTATAAATAAAGATGATCACCCCAGCCATCATTCAGAGGCATCAACTGTGGTTCCAAATCAAGATGTTGTGCAACCTAACTCAAGTTCGGTGGTTCCAAATCAAGATGTTGTGCAACCTAACTCAAGTCCGGTGGTTCCAAATCAAGATGTTGTGCAACCTAACTCAAGTTCAGAATTAGATTTACATTCACATCAAGTTGTGCAGCCTGCCTCAAATTCAAACCTTGATTCACCTACAACTGGTGGAGTAAGAACACAGTCTTCCAACCCAATAAATTTTTCAACTCCTTTGGAAACCAATAATCATTCGATGCAGACTTCAATAGATTCAGCTTCCAGAATGGTTCAGCATTTGGGCTATGATCCACTTAAAAATGAACTGGAAAGAATACAAAAAGCATCAGAGCAAACTATGAAAAACCATGAAGATATGAAATTGCGGTTGACTTCTGATTTTGAAAAAGAATTAGAGGAACTTCGCAGGAAGTATGATATTAAATTTCAAGAGATCGAAGTTGAATTTCAGCAAACAAAGAAGGCCCTGGATAAAAGTTTTAACACAGTTCGTGCAAATAAGATCTTGGCAGATGCTTTTAGGTCTAAATGCTTGGATCTTAAAGTATCTGGTGCGTCAGGACTGCAACAAGATTCAAGTTCTACACAGCATTTAGGACAGCATCCAAGACAGCAAAATGCTACTTTGCCTCCCCTGGGCGCCGGTCCTTCTTCCTGTGGGCCTCCTGCGACCAGTCTGCAGAGTCCCTCCACTACTTCTAACCCTCAGCATACAGTAACACCTATTCAGGGTGGTCAGAGTTTGTCTGGAACTTTACCTGGTGTTTCTACAAGACCACCTATAATCAACTCCATCTCACCCTCTGGAAATAATCAAGGTGGTGGTGAGATACGTGCCCCTGCACCACATCTGCAGCCTTATAGATCCTCAGCATCTGTGCCAGCCTCCACTCCCCCTGGTCTTCAGCACCAGCTGCCGAGTCAACCATCGCCCACTAGCAATCTGCCAAGTCAGTCATCACGCAGTAACATTCCAGCAACTGCTCCACCATCTTCTCATGCTCCACCCCAACCAAAACCAATAACCAATCAGTCTGATCCTATGGGACGACGGCCTGATGCTGCAAGTGGGTTAGCCACTCCTAAATTACCTGCCATGAGTCCGCGTGTGAACATCAGCAGTCAATCAGCTCCAAATCACCCAAATGTTCTGTCACGTATGTCAGATGTGGCTTCAGTGAACAAATCCAGACTCGGCACCGGTAGCAGCATCCGGGCTAACTCTCCCCATCAAGCTTCATCTCCAAACGTAGTCTGTTTATCTGACGATGAATGA 5811 0.4152 MGNGTRSSQRAKDGENYNERMKQDSEKGKISPSPTESDTTGVRRSARETPSKKIIPSSSSARKSERLEKGTPPSPAVSKKSERVEKKNMPSPLRRSGRARGQSSTPSDSKSSGSLNSKQKQKSVKQVTLEAKEVNQSEEHDPETLQVKVKRMDARMYRSLFKKPKEGSSVPSNTPTNETCMVPESVQPNFSGEETLQMSMSNSILDGELVRNGHDGGEMSILSKRKGMTVDMDSDPSASLSKDDNCNFIPNASPSMSDGNVIGTDGPYSKRVRLDYNPKVNESCNPSATETTKLMKYGDYYLELEDATLYRSAENIVGNINIPALLDSQSNNEKYGLNPNSDDSAFQLKDRLSSDIASRCKSDSCRFVEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMNRGISHMLLMWSAPCLFDELKVFHDDAASTPSLKSLFGQPLLKQAIDEFRSVLSQDGEDTDANNCSILLKVKVQQKELTYRGHFSLLGELKIGLLDEEAPQIFWPKLLEGKHFCWKYSSNLFQRSRKKVHYFNGSVDRPDAVTEGILKKRKKVSSNVVDHPSSKSEDENLSNGIKEGASGDLVDRPHVNVVESEKKGTVHGEQRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQLSLCWTAAALLKYKLGHKASLIRAKQQLNFECKKEEVDLIYSLLRCLKKIFLYRTGNCNDTGSPKASESSNTVYSYTGVEQEVELFKIDMSKSIKEIKKKFEKPLKKLCLLHQEEKQKLKAVFESEKAYVERKFLTESAIIRSCSPNDVMRTEKVKVLNIAYEEKIAELKYQHETDLKALEDVQLAQMQELQDKEAAWVEDVKCWGQNELLNIVASKELGTGVEYLQTCDQGQPQNGPKNHFSEGKGHSQSREQKSDGAPSMINEGNGYENFSHEPRGSFRDDSVGLSLPSLNGVVCDRETSGVPGEEVSGFSAGMSQSPEKHMPSLDATCLPVCENEVPIHVADDCNGSKSNVPLNSSLSDERIGGSAVISVLDREAHITVSSTDCPENVFAVVNPPSSMEQITDGDAVNEFSDKELSRTCGTTSPTNVADDIERQNSDGGSLNVQVLDGVIASTPSQAAGSSDGPVTISLSNPPLEEQIPGGGIPVSESSHNDIEALTNALLVDKSTMSDQEEGGPRTVGEFTLSQERLVSRSVNGMEPLGQGQELSSVGTPPDLDTAGELWNSSEQVSNSGHFVPANQPNHVSPIMIPSEKVHQLPAAELPSNMDPSYFPVATEDAHQPINKDDHPSHHSEASTVVPNQDVVQPNSSSVVPNQDVVQPNSSPVVPNQDVVQPNSSSELDLHSHQVVQPASNSNLDSPTTGGVRTQSSNPINFSTPLETNNHSMQTSIDSASRMVQHLGYDPLKNELERIQKASEQTMKNHEDMKLRLTSDFEKELEELRRKYDIKFQEIEVEFQQTKKALDKSFNTVRANKILADAFRSKCLDLKVSGASGLQQDSSSTQHLGQHPRQQNATLPPLGAGPSSCGPPATSLQSPSTTSNPQHTVTPIQGGQSLSGTLPGVSTRPPIINSISPSGNNQGGGEIRAPAPHLQPYRSSASVPASTPPGLQHQLPSQPSPTSNLPSQSSRSNIPATAPPSSHAPPQPKPITNQSDPMGRRPDAASGLATPKLPAMSPRVNISSQSAPNHPNVLSRMSDVASVNKSRLGTGSSIRANSPHQASSPNVVCLSDDE* 1937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3694 1936 Pfam Helicase conserved C-terminal domain 451 562 IPR001650 -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 166 183 - -
Lja3g3694 1936 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 454 617 IPR001650 -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 761 785 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1093 1109 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 761 780 - -
Lja3g3694 1936 Gene3D - 367 603 IPR027417 -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1509 1576 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1093 1144 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 207 244 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1284 1308 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 97 131 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1 144 - -
Lja3g3694 1936 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 314 1900 - -
Lja3g3694 1936 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 25 170 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 164 183 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 12 31 - -
Lja3g3694 1936 Gene3D - 340 366 IPR038718 -
Lja3g3694 1936 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 314 1900 - -
Lja3g3694 1936 Coils Coil 1611 1631 - -
Lja3g3694 1936 Gene3D - 1607 1688 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1879 1936 - -
Lja3g3694 1936 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 25 170 - -
Lja3g3694 1936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 605 IPR027417 -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1699 1936 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1732 1785 - -
Lja3g3694 1936 CDD SF2_C_SNF 449 562 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1699 1724 - -
Lja3g3694 1936 MobiDBLite consensus disorder prediction 1801 1840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3694 Lja-Chr3 73212321 73234672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3694 - K11642 lja:Lj3g3v1100490.1 1852.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3694 3 73212321 73234672 Lja3g0867 3 8772713 8785602 PCT