Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0867 ATGGCCAAGGAAACTGCTTCGAATCGCATCGCTGACAAAGGACCAGTCACGAGATCTTCTACTGAGACAATGTATAAGAAAGTGGTTCTCACTCCTCCCACCACTCGCAATCGAGTCGACAAGGGGACGCCGCCGCCGCCAGTGGCGGCGACTGCGACTGCGACGATGACGACACCGATGCATTTGAGGAGATCTGAGAGAACTAGGAACCTTTCTCCTTCTACTTCTTCTCAGAGCCCGTCCTCGAAGAAACTCAAGAGTGTGAGTCAGTTCACGTTTCAGGAGCGTGATGCTGCTGCTGAAACTTCTTTCAAGCTTAAGACGAAGGATGCTCGTGCTTACCGTACTGTATTTAGAAGAAGATCGAGTAGAGATTGCAATGAGGAGTCAAATAGGGGAGGTAATTTAACTCAGGAAGGTGGTGATGGGGGTGGAGCTCGAGGGGACGAGATGGATGAGTGCTTAAAAGGGGATAGTTTAGATAGTAAAGAAGTTACCAAAGATGGTATTCTGCCACCTGAAGAGGCAGAAACCGAAGATCAGAGTGCAAAGTCTGGGTCAAGTGGGCATGTGAAAGAGCTTTCAGAAAACAATGTGGCTGAAGGTTCGGCGGTACCATCTGATGTCGCAACTCATGAGACTAGTGGGCATGTGCAAGAGCTTTCAGAAAATAATGTGGCTCAAGGTTCACCGGTACCATCTGATGCCGCAACTCATGAGACTAGTGGGCCTGTGCAAGAACTTTCAGAAAATAATGTGACTCAAGGTTTGTTGGTACCATCTGATGCGGCAACTCATGAGACTAGTGGAGCATCTGAAAGGGTTCAGTCTGATTGCCACAGAGAGGAGGAGGCATCCCGGACCTTAGCGTCAAGGAGTTCCATGTTAAATGAAAATTTGAGTCAGAAATGTGCTAATGGTGAAAATTTGATACCTTGTAAGAGAAAAAGAATTACGGGGGACAAGGATTCAGATGTTTCTGCTACATCGGCTGATGACGAGAACTGCAATTTGATTGTGGATGCCAGTTCTTCAAGGCTATGCAGCAATATTGTAGAGACCAGTGAGTCATGTTCCAAAAGGATAAGGCGGATCTCTTTATCAGATATGCAAAGGGATCAGAAGAAATCCATGAATAATGTTGATCAGCTTTGTTCAAAATCTAATGGCGAAAGGTTATCTACCAGCAATAAGGAAGGAAACTCTGGAGATTCAGGGGAGAGACCTTTAGTGAATGGTGTTGAAACTGAGAAAATAAGGAAAGCGCAGAGGAGCTTACATCTAAAGCTGAAGCCAAAGATAGCAAGTCTTTGTGAAATTCTTCTTCTCCCGGACAATGTCAAGAGTATGGTTGAAAATTGTCTTGAATATACTATGAACAATCACCAGATCTGTATGGAACCAGTATCTATATTACAGGCTTTTCAATTATCTCTGTGTTGGACTGTCTCTTCTTTGCTAAACCACAAACTTGACTTTGAAGCTTCCCTCGAGCTTGCAAAGCAGCACTTGAATTTTGACTGTGACAAAGGTGTAGTTGATGAAATTCATTCAATGCTGTGTAAGCTGAAGAAAAACTTCTTATCCCTAACAGGAAATCCTAAAGTCACTGGTTCTCCTACCTCTGAATCACCAAGCAGTAACTATTCAAACATAGAAGAGACAGTGGTTGAATTTGCCAAAAGAGATATTTCCAAAAATATTAAAGAAATTAAGAAGAAAAACCAGTGGGTAAAGCTACTTTTGATGCAAGAGAAGGATAAGCGGAAGTTGGAAAATGATATTAAGAATGAAGAGGCGGATTTTCAGAGAAGGTGCAAAATAGAGTGGACAACAATTAAATCCTTTTCTCCCAATGACGTGATAAGAAAAGAAAAGCTCAAGGTTTACCGTAGCAGCTATGAAAAAACATTGGGAGAATTGAGAAGGCAGCATCAAACACGTCTCCAGGATCTTGAAGCCCAGCAATCAGAAGCAATACGGAAGTTCCAAGAGTCTTGGTCACCCGAAAATGCTCCAAAAGCCCTTGTGTCTGATCATGTTGCTGAAGGAAAGAGTTCTGAAAATATAGTTGAGACCATTTCAATGACTGGATATGGAGTATTTGGAAATAAGTGCCACAATATTGCTGAAAACGAATATGAAGGTCAAGGAAATATTTCCTCTAAGCATTCCAATTCCAGAGAACGATCTTCTGATGGAGCCGCTAGCAGGGAAGAGGTCGAAGGGTGTGAAATTTTTAATCGTGAATCTCCTAATGGATGTCGGCAGGATAGTGTAATATTGATACCACTTTCAGATGATCCTGGTAGAGAGGTGGCTCTTGCAGTGCACCAAACCAGCTCTTCAAATGATGCTCAGGTTGATATTTCTTCTTCCAATCAAGGTAAACCTGATGGGGCTATATGGAGCAACACTCTTTGTAGTTTATCTGCCAAATCTAATGCTTTCAGTGTTGGTGTCAAGAATATGGTTTCCTTTAATTCGCAATCACCTGAAAAACATATCCCTAGTGTAAATACCATGTGCATGCCAAATTGTAAGAATGCTGCACAAATCCATGAGCCTAATGATGGCCATGGTTCAAATAATGCTGACACTCTGAACTCACCTTTGTCTCATGAAAGAATTTCCTCCTGGAATTCAAAATCACCTCAACATGTCGATAGTGTAAATGTCATGTGTGGGCCAAATTCTGAGAATTCTGCACTGGTCCACAAGGCTGATGACAACAATGATTCAAATAATGTTGTCACTCCGAACTCACTGTTGATTGATGAGAGAAGTGCTCATGATGTATTAGATAAAGATGTACATGTGGGGATACCTGGGACTGTCAATTTTACTCCTACATCAACGGAGCAAATACCTGTAGGTGCAGTAAATGACTTAGTTTTGGATAGAGTGTTGCCAACACCATGTGGAACTGCTGGTCCCTGTCATAGTCCTGGTGCTAATGCTATTATTCATTCGAATCAACCTTTTTCAGAGAGAAAGAATCCCGACGAAGTCTCAACAAGCATATCAACTGGACACAACCCAGTTGAAGTGTCAGAAACTAGTCATGACCAGACCACTGTAAGTGAATTAGATAAGGAGGCAGCTGTGGGAATGCTTGGCACAGTCAGCTGTACTGATTGTCCCAATAGTACAGTTCCTCTGAATTTTTCATCCACAGATCAAATATCTGATGAAGGTGCACCTTTAACTGAGAATGCGACACTGAATGTTTCATCCACCAATCAAACATCTGAGGGAGTCTTATCATCAAGGCCTTGTATTTCTAGTCCAAGCATTGATCATCCAGCTGCAATTTCCCTTTTGAATCCAACTTCACAGCAACAAGTTTCTGATACAGTCTTGTCAACAATACCTGATGGACAAATTCCAGTCATTATGCCAGTATGTGGCCATGAAGAGGCTGAATGTCAATTAACAGACAGTGCAGTAGCAGAGAAAAGTACTGCATCAGATCAGCAGGAAGGAGTGCATAGAACCATGATAGAAGACACTTTGACCCAGGCGACTCCTGTTTCTAGATCTGTTGATCTCATTGAGCCCAGAGAAGAAAGGCAGCCATTATCATCTGTAGATTCCCCACATAACCAGGATACCGCTAAAGACACACATAACTCTCAGGTCTCTAATGCAGTTGACATTTTACCAGGTAATCAGTCCAATCAAACTTCATTGCTCATGGAGCTTCCAGAGCAGGTGCAGCAATTACCTTCTGCAGGGTTCCTTTCTTCCGACCAGGACCTATCTAACTTACCTTTGGCAACTGGAATTGAAGACCAGGCAACCAGTGAAGATGCTCTCTCCAGCCACATTCCTGAGGCATCAGTTGAGGTTCAAAATCAAGCTGTTGAGCAACCTGCCTCAAATTTGGAAATTGATTCTCATTCACATCAAGTTGTGCATCCAGCCTCTAATTTGGACACTGATTCACTCATGCCTGGGGGAGTCACAACACAATCTTCAGACCCAAGAAATTTGTCAACTCAAGGAGATACCAATACTCACCCTATTCCAACTGCAACCCAATCAGCTTCTAGGGTGTTTCCGCCTTTGTGCCATGATCCGCTCTATAATGAATTGGACAGAATACGGAAACTGACAGAGCAAACTAGTAAAGTTTGTAAAGATATGAAATTACAAAACGAGTGCAATTATATGAAGGAACTTGTGGAACTTCAGAGGAAGTATGAAGTTAAATTTAGGGAAATTGAGGATGAATTTCAAAGAACAAAGAAAGATCTTGATACACAACTCAACACAGTTTATGTACATAGGCTATTGGCCCAGACTTTTAAGGCTACGTCCGTGGATCATAAAGATTGGGGTGCATCAGGAATGCAGCAAGATGCAAGTTTTGGACAGCAATTACCTCAGCTTTCTAGACAGCAACCTGCTTCTTTGCCCTATATGGTTGCTCCTCCATCTTCCTGTGGGCCTTCTGCAGCCATTTTCCCGAGTTCCCATGCTACACCTGGCTCTCAGACTATGCTACCACCTACACTGGCCGCTTACAGTACAGCAGGAGTTTTCTCAGGTGTTTCTGCAAGACCACCACCTCTTATCAACTCTATCTCTTCTCCCTCAGGAAGTCTTCAAGCTGGTGGGCAGATACGGGCCCCTGCACCACATCTCCAGCCTTTTAGACCCTCTGCGTCAGTTCCGGCCCCAACACCACCACATCTCCAGCCTTTTAGACCCTCCACACCAGTTCCACCCCGAGCACCATCACATCTCCAGCGTTTTAGACCCTCCACATCATTTCCGACCCCAGCAGCACCACATCTCCAGTCTTCTAGACCCTCCACATCAGTTCCGACCCCAGCAGCACCACATCTCCAGCCTTCTAGACCCTCCACATCTGCCCCTTCCGCCTCTAGCCTCTTTACAGTTCCACATATGATGCCAAATCATCCTGCACCTGGTAACATTCCTTTACCTTCTGCCTCGTATTATCAATTGCTCCCCCGACAGCCGACCATCACAGAGCCTGGTCATCATAGGGGGCATTGGCCTGATAGTACAGGTGGGTTATCTGCTCGTAACCTACCTGCCATGGATTTACGCCCAGATACTAATATTCTATCTGGTAATAATCTGCCGAATGTTCTGCCACGTTTATCTGATTCGGCTTCATTAGACCTATCCAAATTAGCCACCTGCAGTAGCACACTGGCTAATTCAACCCATCAAGCTACATCTCCTGATGTAGTGTGTTTATCAGATGATGACTGA 5250 0.4383 MAKETASNRIADKGPVTRSSTETMYKKVVLTPPTTRNRVDKGTPPPPVAATATATMTTPMHLRRSERTRNLSPSTSSQSPSSKKLKSVSQFTFQERDAAAETSFKLKTKDARAYRTVFRRRSSRDCNEESNRGGNLTQEGGDGGGARGDEMDECLKGDSLDSKEVTKDGILPPEEAETEDQSAKSGSSGHVKELSENNVAEGSAVPSDVATHETSGHVQELSENNVAQGSPVPSDAATHETSGPVQELSENNVTQGLLVPSDAATHETSGASERVQSDCHREEEASRTLASRSSMLNENLSQKCANGENLIPCKRKRITGDKDSDVSATSADDENCNLIVDASSSRLCSNIVETSESCSKRIRRISLSDMQRDQKKSMNNVDQLCSKSNGERLSTSNKEGNSGDSGERPLVNGVETEKIRKAQRSLHLKLKPKIASLCEILLLPDNVKSMVENCLEYTMNNHQICMEPVSILQAFQLSLCWTVSSLLNHKLDFEASLELAKQHLNFDCDKGVVDEIHSMLCKLKKNFLSLTGNPKVTGSPTSESPSSNYSNIEETVVEFAKRDISKNIKEIKKKNQWVKLLLMQEKDKRKLENDIKNEEADFQRRCKIEWTTIKSFSPNDVIRKEKLKVYRSSYEKTLGELRRQHQTRLQDLEAQQSEAIRKFQESWSPENAPKALVSDHVAEGKSSENIVETISMTGYGVFGNKCHNIAENEYEGQGNISSKHSNSRERSSDGAASREEVEGCEIFNRESPNGCRQDSVILIPLSDDPGREVALAVHQTSSSNDAQVDISSSNQGKPDGAIWSNTLCSLSAKSNAFSVGVKNMVSFNSQSPEKHIPSVNTMCMPNCKNAAQIHEPNDGHGSNNADTLNSPLSHERISSWNSKSPQHVDSVNVMCGPNSENSALVHKADDNNDSNNVVTPNSLLIDERSAHDVLDKDVHVGIPGTVNFTPTSTEQIPVGAVNDLVLDRVLPTPCGTAGPCHSPGANAIIHSNQPFSERKNPDEVSTSISTGHNPVEVSETSHDQTTVSELDKEAAVGMLGTVSCTDCPNSTVPLNFSSTDQISDEGAPLTENATLNVSSTNQTSEGVLSSRPCISSPSIDHPAAISLLNPTSQQQVSDTVLSTIPDGQIPVIMPVCGHEEAECQLTDSAVAEKSTASDQQEGVHRTMIEDTLTQATPVSRSVDLIEPREERQPLSSVDSPHNQDTAKDTHNSQVSNAVDILPGNQSNQTSLLMELPEQVQQLPSAGFLSSDQDLSNLPLATGIEDQATSEDALSSHIPEASVEVQNQAVEQPASNLEIDSHSHQVVHPASNLDTDSLMPGGVTTQSSDPRNLSTQGDTNTHPIPTATQSASRVFPPLCHDPLYNELDRIRKLTEQTSKVCKDMKLQNECNYMKELVELQRKYEVKFREIEDEFQRTKKDLDTQLNTVYVHRLLAQTFKATSVDHKDWGASGMQQDASFGQQLPQLSRQQPASLPYMVAPPSSCGPSAAIFPSSHATPGSQTMLPPTLAAYSTAGVFSGVSARPPPLINSISSPSGSLQAGGQIRAPAPHLQPFRPSASVPAPTPPHLQPFRPSTPVPPRAPSHLQRFRPSTSFPTPAAPHLQSSRPSTSVPTPAAPHLQPSRPSTSAPSASSLFTVPHMMPNHPAPGNIPLPSASYYQLLPRQPTITEPGHHRGHWPDSTGGLSARNLPAMDLRPDTNILSGNNLPNVLPRLSDSASLDLSKLATCSSTLANSTHQATSPDVVCLSDDD* 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1196 1223 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 145 181 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1585 1636 - -
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 146 217 IPR039322 GO:0031507
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 1123 1205 IPR039322 GO:0031507
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1168 1223 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1310 1347 - -
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 239 668 IPR039322 GO:0031507
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 1615 1749 IPR039322 GO:0031507
Lja3g0867 1749 Coils Coil 1392 1412 - -
Lja3g0867 1749 Gene3D - 1358 1439 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 372 403 - -
Lja3g0867 1749 Coils Coil 642 662 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 726 740 - -
Lja3g0867 1749 PANTHER - 1 136 - -
Lja3g0867 1749 PANTHER - 239 668 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1664 1688 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 369 410 - -
Lja3g0867 1749 PANTHER - 1123 1205 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1553 1579 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 985 1024 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 69 97 - -
Lja3g0867 1749 PANTHER - 146 217 - -
Lja3g0867 1749 PANTHER - 701 745 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 100 128 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 264 294 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 182 250 - -
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 1 136 IPR039322 GO:0031507
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 757 1070 IPR039322 GO:0031507
Lja3g0867 1749 Coils Coil 581 601 - -
Lja3g0867 1749 PANTHER - 1210 1597 - -
Lja3g0867 1749 PANTHER - 757 1070 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 986 1024 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1527 1647 - -
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 701 745 IPR039322 GO:0031507
Lja3g0867 1749 MobiDBLite consensus disorder prediction 273 288 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 1 250 - -
Lja3g0867 1749 PANTHER HELICASE PROTEIN MOM1 1210 1597 IPR039322 GO:0031507
Lja3g0867 1749 PANTHER - 1615 1749 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 12 30 - -
Lja3g0867 1749 MobiDBLite consensus disorder prediction 717 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0867 Lja-Chr3 8772713 8785602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0867 - - lja:Lj0g3v0159629.1 2554.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0867 3 8772713 8785602 Lja3g0867 3 8772713 8785602 ECH
Lja3g3694 3 73212321 73234672 Lja3g0867 3 8772713 8785602 PCT