Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3669 ATGTCGGAACTCAAGAGACCCTCAAAGAACAGAGGCTTCTATGTGAGGATGAAGCTCCTGCAAAAAAATGGATTCAAGCCTCAACAAGACAGCAGAACATGCTGCTTCTACTCATATTACAAATGGATTCTCTGGCTTTCTCTTTCCCTCTATTTCTTCACCTCATTTCTCATCAGCAACGACCCCAACAACACCCCACCACCAATCTCAAACTCCAAATCCAGCGTTGTTCCCTCTCGTACCCTTTTCGAATCCACCAACACTTCAGGGGTGCTGAACGATTTGAAGGTCTTCATCTACGATCTCCCTTCCAAATACAACACCGATTGGCTCGTGAATGAGAGATGCAGAACGCATTTATTCGCCTCAGAGGTTGCCATTCACAGAGCATTGTTGACGAGCAATGTTCGAACGCTCGACCCACATGAAGCTGATTTCTTCTTCGTCCCCGTCTACGTTTCCTGCAACTTCAGCACCGTCAATGGCTTCCCGGCGATCGGTCACGCACGCTCGCTCATCAACTCCGCGGTTCAGCTCATCTCCGGCGAGCACCCGTTCTGGAACAGAAGCAGAGGCTCCGACCACGTCTTTGTTGCTTCCCATGACTTCGGAGCATGCTTCCACACCATGGAGCATGTGGCGATGGCTGATGGGATTCCAGAAATGTTGAAGAACTCGATTGTGTTGCAGACGTTCGGCGTTGTTCACCAGCATCCGTGTCAGGACGTTGAGAATGTGGTGATTCCACCTTACGTTTCGCCGGAAAGTGTGAGCAGAACGCTGGAGAAAGCTCCGGTGAATGGCCGGCGAGACATTTTGGCGTTTTTCCGGGGGAAAATGGAGGTTCATCCTAAGAATATTAGTGGACGATTTTACAGCAAGCAAGTGCGGACGACTATATGGCGAAGGTTCAACAATGACTGGCGGTTTTACCTGCGAAGGCAGAGGTTTGCCGGTTACCAGATGGAAATCGCGCGGTCAGTTTTCTGTTTGTGTCCGCTAGGGTGGGCCCCGTGGAGTCCTCGACTGGTTGAGTCAGTTGCATTGGGGTGCATACCGGTGATCATCGCAGATGGTATCCGGTTACCGTTCTCCTCCGCGGTGCGGTGGCCGGAGATATCACTAACAGTGGCGGAGAAAGATGTTGGGAGGCTAGACCGGATCCTGGAGCGCGTGGTTGCCACGAACCTCAGCGTGATTCAATGGAACCTGTGGGACCCGAAGACAAGGCAAGCGTTACTTTTCAACAATGAAGTCCAGGTTGGCGATGCCACATGGCAGGTCTTGTTGAGTCTGAGTCAGAAGCTCGGTAGGTCCCACCGGAGGTCCATTAATACGGTTTCTGGCGAATTGAAGAGCGACACGTGA 1368 0.5168 MSELKRPSKNRGFYVRMKLLQKNGFKPQQDSRTCCFYSYYKWILWLSLSLYFFTSFLISNDPNNTPPPISNSKSSVVPSRTLFESTNTSGVLNDLKVFIYDLPSKYNTDWLVNERCRTHLFASEVAIHRALLTSNVRTLDPHEADFFFVPVYVSCNFSTVNGFPAIGHARSLINSAVQLISGEHPFWNRSRGSDHVFVASHDFGACFHTMEHVAMADGIPEMLKNSIVLQTFGVVHQHPCQDVENVVIPPYVSPESVSRTLEKAPVNGRRDILAFFRGKMEVHPKNISGRFYSKQVRTTIWRRFNNDWRFYLRRQRFAGYQMEIARSVFCLCPLGWAPWSPRLVESVALGCIPVIIADGIRLPFSSAVRWPEISLTVAEKDVGRLDRILERVVATNLSVIQWNLWDPKTRQALLFNNEVQVGDATWQVLLSLSQKLGRSHRRSINTVSGELKSDT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3669 455 Pfam Exostosin family 94 391 IPR040911 -
Lja3g3669 455 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 447 IPR004263 GO:0006486|GO:0016757
Lja3g3669 455 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 29 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3669 Lja-Chr3 72831066 72833534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3669 K20889 - gmx:100807050 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3669 3 72831066 72833534 Lja3g3669 3 72831066 72833534 ECH
Lja3g3669 3 72831066 72833534 Lja3g0901 3 9165872 9168717 PCT