Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0901 ATGGCGGAACAGAGCAAAAGACCCTCAAAAAACAGGGGTTACTATGTCAGAATGAAGCTCCTCCACAACAAACATGGCAGATTAGAAAAGACCTTCTTCTACAGATACTACAAATATGTCCTATGGATTTCTCTCACCCTCTATTTCTCCTCCTCCTACCTCATCGGCCACCACCACCGCCAGTACCACCCAAAACCAGACACAACAACCCACATCTCAAGAGCACTCTCACAATCAACACCCACCAACGCCACAACCCCATCACTGAAGAACTTGAAGGTGTTCGTCTACGATCTTCCACCAAAGTATAACACGGATTGGCTTGCGAACGAGAGGTGCAGCACCCACTTGTTTGCTTCAGAAGTTAGCATTCACAGAGCCCTGTTGACCAGTGAGGTTAGCACCTTTGACCCTTACGACGCTGACTTCTTCTTCGTCCCTGTCTACGTATCCTGCAACTTCAGCACCATCAATGGCTTCCCGGCGATCGGCCACGCCCGCTCCCTCATCAGCTCCGCCGTGAAGCTCATCTCCAACGACTACCCCTTCTGGAACAGAAGCAGAGGCTCCGACCACGTCTTCGTCGCTTCCCACGACTTCGGCTCTTGCTTCCACACCCTGGAGGACGTGGCGATGGAAGATGGGGTACCAGAAATTATGAAGAACTCAATCGTGTTACAGACGTTTGGGGTAAAGTACGATCATCCATGCCAGAGGGTGGAGCATGTGGTGATTCCGCCGTACATCTCACCGGAGAGTGTCCGGAGGAATTTCCCGGCGAACGGACGGCGAGATATATGGGTTTTCTTCCGGGGAAAAATGGAGGTTCATCCGAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGAGGACCATGATATGGCGGAGATTCAACGGTGACCGGAGGTTTTACCTCCGGAGGCATAGATTTGCCGGTTACCAGTCAGAGATTGCGCGCTCGGTGTTCTGTTTATGTCCCTTGGGGTGGGCCCCGTGGAGTCCGAGGCTGGTGGAGTCGGTTGCATTAGGCTGCGTGCCGGTTATCATAGCTGATGGCATCCGGTTGCCATTCCCCTCCGCCGTGAGGTGGGCGGATATATCGGTGACGGTGGCGGAGCACGACGTGGGGAAGCTATCGGAGATACTGGAACATGTGGCGGCGACGAACCTGAGTTCCATTCAGAGGAACCTGTGGGACCCGCGGACGAGGAGGGCTTTGCTATTCAACAGCGAGGTGCAGGAAGGGGACGCCACGTGGCAGGTGCTGCGAGGGTTGAGTGAAAAGGTGGACAGGTCTTATAGGAGTTCGAGGGTTTCACGCCAATTGGATGTGGACACGTAG 1344 0.5357 MAEQSKRPSKNRGYYVRMKLLHNKHGRLEKTFFYRYYKYVLWISLTLYFSSSYLIGHHHRQYHPKPDTTTHISRALSQSTPTNATTPSLKNLKVFVYDLPPKYNTDWLANERCSTHLFASEVSIHRALLTSEVSTFDPYDADFFFVPVYVSCNFSTINGFPAIGHARSLISSAVKLISNDYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMEDGVPEIMKNSIVLQTFGVKYDHPCQRVEHVVIPPYISPESVRRNFPANGRRDIWVFFRGKMEVHPKNVSGRFYSKKVRTMIWRRFNGDRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFPSAVRWADISVTVAEHDVGKLSEILEHVAATNLSSIQRNLWDPRTRRALLFNSEVQEGDATWQVLRGLSEKVDRSYRSSRVSRQLDVDT* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0901 447 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 26 437 IPR004263 GO:0006486|GO:0016757
Lja3g0901 447 Pfam Exostosin family 90 385 IPR040911 -
Lja3g0901 447 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 26 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0901 Lja-Chr3 9165872 9168717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0901 K20889 - gmx:100818569 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0901 3 9165872 9168717 Lja3g0901 3 9165872 9168717 ECH
Lja3g3669 3 72831066 72833534 Lja3g0901 3 9165872 9168717 PCT