Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3638 ATGGCTGCGCGTGTGGATCTCGATGGCAACCCCATCAAGCCATTGACCATTTGCATGATCGGCGCCGGAGGCTTCATCGGATCCCACCTCTGCGAGAAGCTCATGTCGGAGACGCCGCACAAGGTGCTCGCTCTCGATGTCTACAGTGACAAGATCAAGCACCTCTTGGAGCCTGACACGCTCCCTTGGGCTGGTCGCATCCACTTCCATCGCCTCAACATCAAGCACGATTCTAGGCTTGAAGGTCTCATCAAGATGTCAGATCTGACTATTAATCTCGCTGCAATATGCACTCCTGCTGATTACAACACTCGTCCTTTGGACACCATTTACAGCAATTTCATTGATGCTCTTCCTGTGGCGAAGTACTGTTCGGAAAACAACAAGCGTCTCATTCATTTTTCTACTTGTGAAGTGTATGGGAAAACAATTGGAAGCTTTCTTCCTAAGGATAGCCCACTTCGTCAGGATCCTGCATATTATGTTCTTAAAGAAGATGAGTCCCCTTGCATTTTTGGTTCAATTGAAAAGCAGAGATGGTCCTATGCTTGTGCAAAGCAGTTGATTGAGAGGCTGATTTACGCTGAGGGTGCTGAAAATGGCATGGAGTTCACAATTGTGAGACCTTTTAATTGGATCGGACCAAGAATGGATTTCATTCCTGGCATTGATGGTCCAAGTGAGGGTGTTCCCAGGGTTCTTGCATGCTTTAGCAATAACCTCCTCCGCCGAGAGCCCCTCAAGCTTGTGGATGGTGGCGAATCCCAGAGGACTTTCATTTATATTAAGGACGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGGGCAAATGGGCACATTTTTAATGTGGGTAACCCACACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACTAAGGTTTATTCAAAGGTAAGTGAAGAAGCTCCTTTGGAAAATCCTACAATAGATGTGAGCTCCAAAGAATTTTATGGTGAGGGGTATGACGATAGTGACAAGAGAATTCCTGACATGACCATAATTAACAAGCAACTTGGCTGGAATCCTAAGACCTCACTTTGGGACCTTCTTGAATCTACTCTAACTTATCAGCATAGGACTTATGCTGAAGCCATTAAGAAGGCAATAGCAAAACCAGTTGCAAGCTAA 1161 0.4539 MAARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYSDKIKHLLEPDTLPWAGRIHFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVAKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTKVYSKVSEEAPLENPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKAIAKPVAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3638 386 Pfam NAD dependent epimerase/dehydratase family 17 287 IPR001509 -
Lja3g3638 386 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 385 - -
Lja3g3638 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 369 IPR036291 -
Lja3g3638 386 CDD Arna_like_SDR_e 16 371 IPR045869 GO:0016831
Lja3g3638 386 PANTHER UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2-LIKE 1 385 - -
Lja3g3638 386 Gene3D - 15 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3638 Lja-Chr3 72159119 72162283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3638 K12449 - gmx:100792879 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3638 3 72159119 72162283 Lja3g3638 3 72159119 72162283 ECH
Lja3g3638 3 72159119 72162283 Lja3g0938 3 9537248 9540737 PCT