Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3620 ATGCAGTCTCTATCACCGCCTTCATCTTCCACCACACTCAACCCTATCATTCGCCCTCAACTTTCCCAGAACCGGGTCCGGTTCACCGTGAAATGTGGTTACCGGCTCGAACCGGGTAGCTACGGAGTCGGAACAAGCCGAGCCGACTGGCAAAGCTCCTGCGCCATATTAGCCAGCAAGGTTGTTTCCCAGGAGCAATCTCCGACTGACCAAAATGGCAGCGCCGCCGACAAGCTCGCCACCGTCAACGGCCACAAATCCGCCAAGGCAGACCTTCAGCTGGTTCCTATAGGAAACCTCGCCGGAGAAATCAAAGCGATCCAGCCGAAGCCGCTGACAATCTCCGACCTCGCGCCGGCTCCGATGCACGGCTCGACTCTCCGCGTCGCGTACCAGGGCGTCCCCGGCGCGTATTCCGAGGCTGCGGCGGGGAAGGCTTACCCGAACTGCGAGGCCATCCCGTGTGACCAATTCGAGGTAGCGTTCCAGGCGGTGGAGCTTTGGATCGCCGACCGCGCTGTCCTACCAGTAGAAAACTCCCTCGGCGGCTCAATCCACCGTAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGAGAAGTCCAACTTCCAGTCCACCACTGCCTCCTCGCCCTCCCCGGAGTCCGCAAGGACTATCTCACGCGCGTGATTTCCCACCCTCAAGCACTCTCCCAGTGCGAGCACACGTTAACCAAACTAGGCCTCAACGTGGCGCGTGAGGCCGTCGACGACACAGCGGGAGCAGCGGAATACATCGCGGCGAACAACCTCCGCGACACCGCCGCCATAGCAAGCGCACGCGCGGCGGAGCTATACGGATTACAAGTGATGGCGGATGGGATCCAAGATGACCCGAGCAACGTGACCCGATTCGTGATGCTGGCACGGGAACCGATAATTCCACGGACTGATCGGCCGTTCAAGACGAGCATTGTGTTCGCGCATGATAAAGGGACTTCGGTGTTGTTCAAGGTGCTATCGGCGTTTGCGTTTCGGAATATCAGTTTGACGAAGATTGAGTCGCGGCCGCACCGGAACCGGCCGATTCGGCTGGTGGATGATGCGAATGTGGGGACGGCGAAGCACTTTGAGTATCTGTTTTACGTGGATTTCGAGGCGTCGATGGCGGAGGTTAGGGCGCAGAATGCTTTGGCGGAGGTGCAGGAATTCACGTCGTTCTTGCGAGTGTTGGGGAGTTACCCCATGGATATGACGCCCTGGACTCCTTCTTCTAGGGGAGAATAG 1272 0.592 MQSLSPPSSSTTLNPIIRPQLSQNRVRFTVKCGYRLEPGSYGVGTSRADWQSSCAILASKVVSQEQSPTDQNGSAADKLATVNGHKSAKADLQLVPIGNLAGEIKAIQPKPLTISDLAPAPMHGSTLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKDYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANNLRDTAAIASARAAELYGLQVMADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3620 423 Gene3D - 212 293 - -
Lja3g3620 423 Gene3D - 123 211 - -
Lja3g3620 423 PANTHER AROGENATE DEHYDRATASE 32 420 - -
Lja3g3620 423 ProSitePatterns Prephenate dehydratase signature 1. 281 303 IPR018528 GO:0004664|GO:0009094
Lja3g3620 423 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 32 420 - -
Lja3g3620 423 CDD ACT_CM-PDT 317 410 - -
Lja3g3620 423 Pfam Prephenate dehydratase 129 307 IPR001086 GO:0004664|GO:0009094
Lja3g3620 423 Gene3D - 312 413 - -
Lja3g3620 423 CDD PBP2_Ct-PDT_like 126 307 - -
Lja3g3620 423 SUPERFAMILY Periplasmic binding protein-like II 128 311 - -
Lja3g3620 423 ProSiteProfiles Prephenate dehydratase domain profile. 128 305 IPR001086 GO:0004664|GO:0009094
Lja3g3620 423 ProSiteProfiles ACT domain profile. 319 410 IPR002912 -
Lja3g3620 423 ProSitePatterns Prephenate dehydratase signature 2. 345 352 IPR018528 GO:0004664|GO:0009094
Lja3g3620 423 SUPERFAMILY ACT-like 300 412 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3620 Lja-Chr3 71696744 71698553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3620 K05359 - gmx:100781285 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3620 3 71696744 71698553 Lja3g3620 3 71696744 71698553 ECH
Lja3g3620 3 71696744 71698553 Lja3g0948 3 9665747 9667761 PCT