Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3615 ATGAATGTTTCAGGCATGATTTCTTGTTTTAACGAAAACGCAGTGAATGTGTCACATTCTTCATGTTCTAGCTATTCAACTTCAAAAAACTCTTGCATATCTCCAATCCTTTCACCTTCAACTCAAATTTCAGTCTCCTCTGTCTACAGAACAATCCTCTCTAACCAGAAGCAGCTTCTGATCACAGTCACATGGTGCAAGAGCCACTCCAATCAAGGACTCACCATAAGCTTTGGTGAAAACAGAGATCCATTAGCAGCTGTTTTCAGACTCAACACAAATTCACGGTTTTTCAGGAAGAAGAAAGGAAGCAAGTTGATGGAATCTTCTGATGAAGAGTCAAGAGTTGAAGTCTTCTGGGATCTTTCAAATGCAAAATATGACACAGGACCTGAACCTGTTGATGGGTTTTTTATAGCAATTCTTGTAGATTCAGAACTTGGTCTTGTTCTGGGTGAGATTTCTGAAGAAACTGTGACTAAGAAGCTGAAAAATCGAACCATTTTGGGTAAATCTTCACTGTTATCACGGCGAGAGCATTGTTCAGGGAACACTACCCTTTACAATACCAAGGCTCAGTTCTGTGACTCTGGAACATGGCATGAAATTTCAATCAGATGCAGTGGTGAAAGTGAGGGTCTAAAATCCCCTGTTCTCTCTGTTTCTATTGATAAGAAGATGGTGATTCGTGTGAAGAGGTTGCAGTGGAATTTCAGGGGAAATCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAATGCTGATTCTGATGGGTATGCAGTTTTCATGTTCAGGACTAGGAGTGGGTTGGATAGCAGATTGTGGTTAGAGGAGAAATCTGCATTGAAAGATAAAGATGGAGATAAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATAA 933 0.3998 MNVSGMISCFNENAVNVSHSSCSSYSTSKNSCISPILSPSTQISVSSVYRTILSNQKQLLITVTWCKSHSNQGLTISFGENRDPLAAVFRLNTNSRFFRKKKGSKLMESSDEESRVEVFWDLSNAKYDTGPEPVDGFFIAILVDSELGLVLGEISEETVTKKLKNRTILGKSSLLSRREHCSGNTTLYNTKAQFCDSGTWHEISIRCSGESEGLKSPVLSVSIDKKMVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNADSDGYAVFMFRTRSGLDSRLWLEEKSALKDKDGDKFSLLIYACKST* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3615 310 PANTHER DUF868 FAMILY PROTEIN 6 309 - -
Lja3g3615 310 Pfam Plant protein of unknown function (DUF868) 41 308 IPR008586 -
Lja3g3615 310 PANTHER EXPRESSED PROTEIN 6 309 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3615 Lja-Chr3 71590390 71591822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3615 8 309 EF-hand Containing Proteins AT5G28150 35.197 3.58e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3615 - - gmx:100798692 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3615 3 71590390 71591822 Lja3g3615 3 71590390 71591822 ECH
Lja3g3615 3 71590390 71591822 Lja3g0951 3 9705239 9706615 PCT