Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0951 ATGAGAGACATAGTTTCTTGTTTCAGTGAGAACGCAGTGAATGTGGCTTCTCATTCTTCATCATGTTCTAGCTATTCTAACAACGCTTGCATCTCTCCAAGTTCAGCACCTTCAATCCAAAACTCAGTTTCTAGTGTCTACAAGCTAGTTCTGTCTTCAACGTTAAAGCAGTTCTTAATCACTGTCACATGGTGTAAGAGTCACTCCAATCAAGGACTCAGCATAAGCTTTGGTGATGATAATCATGACCCTGCACCTGCCCCTGTACCCTTCAGACTCAACACCAATTCAAGGTTTTTCAGGAAGAAGAAAGGTAGCAAGTTGCTGGATTCTTCTGAGGAAAAGATTGAGATCTTCTGGGATCTGTCAAATGCGAATTATGATTCTGGACCTGAACCTGTTGATGGGTTTTACGTTTTGATTCTGGTTGATTCAGAAATTGGTCTTGTTCTTGGTGACATGGCAGGGGAAACAGTGTCCAAGAAGTTCAAAATCAACAGCCCTGTGGCTAAGGTTTCACTATTGTCACGGAGAGAGCATTGTTCTGGAAATTCTCTTTACACAACCAAGGCTCAATTCTGTGACAGTGGAACATGGCATGATGTTTTGATCAGATGCAGTGTGGAAGAGAGTGAAGGGTTGTTCAAGTCCCCTGTTTTGTCAGTCTGCATTGACAAGAAGACAGTGATCCGGGTGAAGAGGTTGCAGTGGAATTTCAGGGGGAATCAGACAATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAATCCAGCTTCTGGGGATGCAGTTTTCATGTTCAGGACTAGAAGTGGATTGGATAGCAGGTTGTGGTTGGAGGAGAAGATTGCACAGAAAGATAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA 933 0.4277 MRDIVSCFSENAVNVASHSSSCSSYSNNACISPSSAPSIQNSVSSVYKLVLSSTLKQFLITVTWCKSHSNQGLSISFGDDNHDPAPAPVPFRLNTNSRFFRKKKGSKLLDSSEEKIEIFWDLSNANYDSGPEPVDGFYVLILVDSEIGLVLGDMAGETVSKKFKINSPVAKVSLLSRREHCSGNSLYTTKAQFCDSGTWHDVLIRCSVEESEGLFKSPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPASGDAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKTS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0951 310 PANTHER DUF868 FAMILY PROTEIN 1 309 - -
Lja3g0951 310 Pfam Plant protein of unknown function (DUF868) 39 308 IPR008586 -
Lja3g0951 310 PANTHER EXPRESSED PROTEIN 1 309 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0951 Lja-Chr3 9705239 9706615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0951 1 309 EF-hand Containing Proteins AT5G28150 38.141 2.93e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0951 - - gmx:100797969 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0951 3 9705239 9706615 Lja3g0951 3 9705239 9706615 ECH
Lja3g3615 3 71590390 71591822 Lja3g0951 3 9705239 9706615 PCT