Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3588 ATGAAATCAGCAATGGCAAGTTGCTCCTTCCTCTTCAAACTGCTATTGCTGATTCTCACAGTTTCAGATTTTTGTGTGCTAACTCAAGGTCACAATTTTGGAATCAACTATGGACAAATAGCTAACAATCTTCCTCCACCTTCTCGGGTGGCTGTTCTTATAAACTCTTTGAATGTCAGCAGAATCAAACTCTATGATGCTGATCCTAATGTTCTCTCAGCATTCGCCAATTCAAATGTTGAATTCATCATAGGACTTGGGAATCAGGATCTTCAGAGCATGAGAGACCCTTCTAAGGCACAAAGCTGGGTTCAACAGAATGTTCAACCTTATATTTCACAGACCAAAATCACTTGCATCACAGTGGGGAATGAAGTCTACAATAGCAATGATACTAATCTCATGATCAACCTTCTCCCAGCAATGAAAAGTGTTTACAATGCACTTGTGAATCTTGGATTAGCACAGCAAGTTACTGTTACAACTGCACATTCTTTCAACATTTTATCAAATTCATTCCCTCCTTCATCTGGGACCTTTAGTCAAGGCTTGATTCAATATATTCAACCCCTTCTTGATTTCCATGCTCAGATCAAATCACCTTTCCTCATTAATGCTTATCCTTTCTTTGCATACAAGGCAGACCCAAAAAATATCCCTTTAAGCTATGTGTTGTTTCAGCCAAATTCCGGTTCTGTTGATCCAATGACCAATTTGCATTATGATAACATGTTGTATGCTCAGATTGATGCTGTTCACTTTGCCATCAAAGCTCTGGGGCATACAGATGTTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCTAAGGGGGACCCTGATGAGGTTGGAGCCACACCAGAGAATGCAGGAATTTATAATAGTAATTTGTTGAAGAGGATTCAGATGAAGCAAGGAACTCCTGCAAATCCTTCTGTTCCAATTGATATTTTTGTGTTTGCTCTTTTCAATGAAGATATGAAGCCAGGTCCTATTTCAGAGAGAAACTATGGTCTTTATTATCCTGATGGCACCCCAGTTTACAACCTTGGAATTTCATCATCACAGTCACCAGGTTATCTCCCACAGATGGTTATAGAATCAAAATCAAATGTTTTGTCCATTAATTTTCTCATCTACATACTCACATGCTTGATGTTTGCTTGGGGGCTTTCAAGACCATAA 1182 0.3917 MKSAMASCSFLFKLLLLILTVSDFCVLTQGHNFGINYGQIANNLPPPSRVAVLINSLNVSRIKLYDADPNVLSAFANSNVEFIIGLGNQDLQSMRDPSKAQSWVQQNVQPYISQTKITCITVGNEVYNSNDTNLMINLLPAMKSVYNALVNLGLAQQVTVTTAHSFNILSNSFPPSSGTFSQGLIQYIQPLLDFHAQIKSPFLINAYPFFAYKADPKNIPLSYVLFQPNSGSVDPMTNLHYDNMLYAQIDAVHFAIKALGHTDVEVRISETGWPSKGDPDEVGATPENAGIYNSNLLKRIQMKQGTPANPSVPIDIFVFALFNEDMKPGPISERNYGLYYPDGTPVYNLGISSSQSPGYLPQMVIESKSNVLSINFLIYILTCLMFAWGLSRP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3588 393 Gene3D Glycosidases 32 357 - -
Lja3g3588 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 9 367 - -
Lja3g3588 393 SUPERFAMILY (Trans)glycosidases 33 349 IPR017853 -
Lja3g3588 393 Pfam Glycosyl hydrolases family 17 34 349 IPR000490 GO:0004553|GO:0005975
Lja3g3588 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 367 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3588 Lja-Chr3 71057409 71061360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3588 83 388 Glycoside Hydrolase AT2G27500 65.147 1.09e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3588 - - gmx:100786020 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3588 3 71057409 71061360 Lja3g3588 3 71057409 71061360 ECH
Lja3g3588 3 71057409 71061360 Lja3g0984 3 10097806 10102509 PCT