Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0984 ATGGCCAAGATCAGATCAGAAATCACAACTTTTTCCTCCTTCTTCAAATCAGTGCCTTTGCTTCTTCTCATCATTTCTGATTCATTTGTGCAAATTCATGGCCTTGGTTTTGGAATCAACTATGGACAGATAGCCAACAATCTACCTTCTGCAACTCGAGTGGCTGTTCTTATAAAATCCATGAATGTGAGTAGAATCAAACTCTATGATGCTGATCCAAATGTTCTCATCGCCTTTTCGAAATCGAATGTGGAATTCGCTGTAGGACTAGGAAATGAGCATCTTCAGAACATGACAAACCCTTCTAAAGCTCAAGCTTGGATTCAGAATCATGTTCAACCTCACCTTTCACAAACCAAAATCACTTGCATCACTGTGGGAAATGAAGTTTCCAATAGCAATGACACTAACTTAATGCAGAACCTTCTCCCAGCAATGCAAAATGTGCATGGTGCCCTTGTGAATCTTGGACTAGACCAACTAGTTTCTGTCACAACAGCACATTCTTTCAACATCATAGCCAATTCCTACCCTCCTTCAAATGGTGTTTTTAGGCAAGATCTGATGCAATATATCCAACCCCTTTTGGAATTTCTTTCACAAATCAACTCACCTTTTCTCATCAATGCATACCCTTTCTTTGCATACAAAGATAACCCAGATGAGGTTCCTTTAAACTATGCACTTTTTCAGCCAAATCAAGGCATGGTTGATTCAAAAACCAACTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAAGCTGTGGGGTACAGCAACATTGAAGTGAGGATTTCTGAGACAGGTTGGCCTTCTAAGGGGGACCCTGATGAAATTGGAGCTACACCACAAAATGCACTATTGTATAATGGTAACTTGATGAGAAGGATAGAGAAGAAGGAAGGAACTCCAGCAAATCCTTCAGTTCCAATTGATATTTATGTGTTTGCACTTTTTAATGAGAATATGAAGCCTGGTCCTGCTTCAGAGAGAAATTATGGCCTTTACTATCCTGATGGCAATCCTGTTTATAACATTGGATTGCAGGGTTATCTCCCAGAGATGGTTATGCCATCCAAATCTAATTTTTTGTCTGTCAATTATCTCGTCTGTACAATTACATGCTTGATTTTTTCTTGGGAGCTTTCAAGATTGTGA 1179 0.3927 MAKIRSEITTFSSFFKSVPLLLLIISDSFVQIHGLGFGINYGQIANNLPSATRVAVLIKSMNVSRIKLYDADPNVLIAFSKSNVEFAVGLGNEHLQNMTNPSKAQAWIQNHVQPHLSQTKITCITVGNEVSNSNDTNLMQNLLPAMQNVHGALVNLGLDQLVSVTTAHSFNIIANSYPPSNGVFRQDLMQYIQPLLEFLSQINSPFLINAYPFFAYKDNPDEVPLNYALFQPNQGMVDSKTNLHYDNMLYAQIDAVYAAIKAVGYSNIEVRISETGWPSKGDPDEIGATPQNALLYNGNLMRRIEKKEGTPANPSVPIDIYVFALFNENMKPGPASERNYGLYYPDGNPVYNIGLQGYLPEMVMPSKSNFLSVNYLVCTITCLIFSWELSRL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0984 392 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
Lja3g0984 392 SUPERFAMILY (Trans)glycosidases 37 354 IPR017853 -
Lja3g0984 392 Gene3D Glycosidases 36 359 - -
Lja3g0984 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 369 IPR044965 GO:0004553|GO:0005975
Lja3g0984 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 20 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0984 Lja-Chr3 10097806 10102509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0984 88 387 Glycoside Hydrolase AT2G27500 63.787 4.67e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0984 - - lja:Lj3g3v2994490.1 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0984 3 10097806 10102509 Lja3g0984 3 10097806 10102509 ECH
Lja3g3588 3 71057409 71061360 Lja3g0984 3 10097806 10102509 PCT