Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3581 ATGGATCTATACGACCCGAACCGCTTCTTCGGCGTCCCACCCCAAAACCGCACCTCCGACGACGACGACCTCATCGAAGACGACGTCGTTTTCTCCCTCAACGACCTCCTCGAACCCTCCACCCCCTCCCACCGCCGCAAGGGTTTCGCCTCCGGAATCCTCGCCGCGCTGCCTGGAAACGACGACGCTTCTCCGCACTTCTTCCAAAAGGCTCCGGTTTCCGTTTCTGTTCCTGTGCCTTCCTCCTCGCGCCCCATCCCGAGACCGCGGACGGACCGGACTCCAACTTCGCCGGCCAGGTTCCACCAGTCGGCGCCGGTGAACGTGCCGGTCATGTCGCCGGGGATGATGAAGGCTGCACGGAGGCGTCTTGAGTCTGACGAAGATGAAGGTGATGCAGCGGCGGAGGAGGAGGACGGGGAGATGATGCTGCCTCCGCATGAGTTGGTGGCGAGAAACTCGGCGGTGCTGGCGTGCTCTTGTCTTGAAGGAGTTGGGAGAACGCTGAAAGGGAGAGACCTGCGGCGGGTTCGGAATGCTGTTTTGCGACAAACAGGTTTCCTTTGA 567 0.6155 MDLYDPNRFFGVPPQNRTSDDDDLIEDDVVFSLNDLLEPSTPSHRRKGFASGILAALPGNDDASPHFFQKAPVSVSVPVPSSSRPIPRPRTDRTPTSPARFHQSAPVNVPVMSPGMMKAARRRLESDEDEGDAAAEEEDGEMMLPPHELVARNSAVLACSCLEGVGRTLKGRDLRRVRNAVLRQTGFL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3581 188 PANTHER EXPRESSED PROTEIN 17 188 - -
Lja3g3581 188 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g3581 188 Pfam Senescence regulator 23 188 IPR007608 -
Lja3g3581 188 Coils Coil 117 137 - -
Lja3g3581 188 PANTHER - 17 188 - -
Lja3g3581 188 MobiDBLite consensus disorder prediction 76 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3581 Lja-Chr3 70950955 70952058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3581 - - gmx:100778127 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3581 3 70950955 70952058 Lja3g0994 3 10198958 10199686 PCT