Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0994 ATGGACCACCTCCATCCACACCGGTTCCGCAACCGCAAATCCATCCCCGCCGAACGCCTCCTCGGCATCCCGCCCTACGCGCCACCACTCAACCCCACCGTAACCGTCGAGCTTCTCGAAGACGACGTCGTTTTCAGCGGCGATTACTGCACCCAGCAAGCAATCCGCCAAATCTACAACCCTCCTTCTTCCTCTCCCCCCTCCTCCTCCTCCTCAACTTCCACGTCGGCCACCGCCGCCGCTACTCCCATCCACCCTCACTCCTTCGGCATCCTCGCCGCACTCCCCGACCACGAAACTCACCCGCACCTCCGTAGCGTCTCGAAGTCGAAACGCTTCCGTAAATCCTCCTCCACGCGCGTGATCCCTTCCATTCCGAAACAAGCGCCGGCGCGAGACCGGATCGAGGCGTGGATATCCTCGTCGTACTCCGACATCAGGTTATACCAATCGGTGCCGTTGAATTGCCCGGAGCTACCGGAGGCGGTGCTGATTGCGCAGAGGAGGCGATTCGACGAGGAGGAGGAGAAGAAAGAGGAGGCGTTGGAGGAGGAGAGCGACGAGGTGTTTCCGCCGCATGAAGTGGTGGCGAAGAATACGGCGAAGAGATCGGTTAAGGAGCCCGTGGTGGCTTACTCGCTCATGGAAGGTGCTGGAAGGACGCTCAAAGGGAGGGACATGCGGCAGGTTCGGAACGCGATTTTGCGCCAAACAGGTTTCCTTGATTGA 729 0.6022 MDHLHPHRFRNRKSIPAERLLGIPPYAPPLNPTVTVELLEDDVVFSGDYCTQQAIRQIYNPPSSSPPSSSSSTSTSATAAATPIHPHSFGILAALPDHETHPHLRSVSKSKRFRKSSSTRVIPSIPKQAPARDRIEAWISSSYSDIRLYQSVPLNCPELPEAVLIAQRRRFDEEEEKKEEALEEESDEVFPPHEVVAKNTAKRSVKEPVVAYSLMEGAGRTLKGRDMRQVRNAILRQTGFLD* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0994 242 Coils Coil 164 188 - -
Lja3g0994 242 MobiDBLite consensus disorder prediction 102 127 - -
Lja3g0994 242 PANTHER - 4 242 - -
Lja3g0994 242 Pfam Senescence regulator 37 242 IPR007608 -
Lja3g0994 242 MobiDBLite consensus disorder prediction 58 80 - -
Lja3g0994 242 PANTHER EXPRESSED PROTEIN 4 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0994 Lja-Chr3 10198958 10199686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0994 - - gmx:100779194 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3581 3 70950955 70952058 Lja3g0994 3 10198958 10199686 PCT