Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3561 ATGGCTAATTCAACAAACTCCGCCACCACCATCACCGCCCTCCACTCTGATATCATCCAATCCCACATCCTTACTCGCCTCGACGGCCCCACTTTAGCCTCCACCTCTTCCTCCACCTCCCACCTCCGCAGCCTCTGCACCCAAAACCCCCTCTGGCGGGAAATCTGCACCGCCACGTGGCCCTCCCTCCAACAACCCCTAGCCGACTCCCTCATCTCCACCTTCCCCACCGCCCACCGCTCTATCTTCTCCGACTCCTTCCCTTCCCTCCACGACTCTCCTCTCCCCCACAAGCTACCACCCTCGCCGCCTCCGCCGGAGCTCATCTCCGCCGTGGACTTATACTACAAGGGCAAACCCGTCCTTTCCAGAGTCATCCGCACCGAGACAGAAAAGAGCTGGTTCCTCACCTCCCCTCTCTGGATCGACCTCCTCGAAACCAACGAGATGGTCCAAACTCCGGTGAAGCTCGCCCCAAACGTGGAAGACCGAGAATGGCTGAATCACGTGGAGGAGAATCTTACCCTCAGCTGGATCGTGATAAACCCGGCCAATCAGCGGGCGGCGAATTTGTCCAGCCGGTTCCCGGTGTCGGTGCGGCGGCACTGGTTTACCGGCGAGTTGGAGATTCTCTACGCCGTGGCGATGGGGGCGGTGCAGTGGACGGTGAAGGTCACGTGCTGCGGGAAGGCCGGCGGTGAGATGCACGTGCGGGAGGTTAGTCTCGCGATGGAGGATGCAGACGGGAGGCACGTGATAGGGGGGGAGTGTATGATGGTTTTGCAGGCGGCGATGGAGGGTGGGAAGAGGAGGAAGGTGGTGGCGGAGGAAGCGAAGAAGAGTTTTGAGAGATTTTGTTTGGTGAAGAGAGAGAGGAGAGAGAGGAGATTGAAGAGAGAGAAAGCGTTGGATATGAGTGTTATGCTTGTTTCTTTTGCTGTTGTTTTCACTTTGCTCTTTCGGTTAGTGACCTATTGGGCTTGA 984 0.5793 MANSTNSATTITALHSDIIQSHILTRLDGPTLASTSSSTSHLRSLCTQNPLWREICTATWPSLQQPLADSLISTFPTAHRSIFSDSFPSLHDSPLPHKLPPSPPPPELISAVDLYYKGKPVLSRVIRTETEKSWFLTSPLWIDLLETNEMVQTPVKLAPNVEDREWLNHVEENLTLSWIVINPANQRAANLSSRFPVSVRRHWFTGELEILYAVAMGAVQWTVKVTCCGKAGGEMHVREVSLAMEDADGRHVIGGECMMVLQAAMEGGKRRKVVAEEAKKSFERFCLVKRERRERRLKREKALDMSVMLVSFAVVFTLLFRLVTYWA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3561 327 SUPERFAMILY F-box domain 16 75 IPR036047 GO:0005515
Lja3g3561 327 PANTHER F-BOX PROTEIN-RELATED 6 318 IPR045283 -
Lja3g3561 327 PANTHER F-BOX PLANT-LIKE PROTEIN 6 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3561 Lja-Chr3 70626880 70628671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3561 - - gmx:100794825 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3561 3 70626880 70628671 Lja3g3561 3 70626880 70628671 ECH
Lja3g3561 3 70626880 70628671 Lja3g1003 3 10305164 10306609 PCT