Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1003 ATGGCAGCGGTGCCTCTTTCATTAGCACCGCCAGAATATGCAGCGGATCATCAAAACGTGGCAGCTCCATCATGTTTAAGCTTCATCACCGCCGTGCACCCTGACATCATCCTGGCCCACATCCTCACGCGCCTCGACCCCGCCACGCTTGCAACCGCCGCATCAGCCTCCTCCCACCTCCGCCGCCTCTGTGCTGATGAGGATCTCTGGCAAAAAATCTGCACCGCCACGTGGCCCTCACTCACGGACCCCACTGCAAGCCATGTCATCTCCACCTTCCCCGCCGGCCACCGTTCCATTTTCTCCGACGCGTTTCCCTCCCTCCACCACAACCATTCCCCCTCCCAGCCCCACCGTCGGCTACCGTCACCTCCTCCGCCGGAGCTTATCTCCGCCGTTGACATTTACTACAACGGTGAGCCCATGTTTTCCAGGGTCCACCGCACCGAAACAGAGAAGAACTGGTTTCTGACCTCACCTTTATGTGTGGAGATGCTTGAACCGAACGAGGTGGTCCCCGCGCCGGTGAGATTCGCTGGGAAATACGAGAAGTGGATGAGGCACTTGGAGGAGAGCCTGCGGCTGAGCTGGGTGGTGATCGATCCAACCCTTAAGCGCGCGGTGAATGTGTCTAGCCGGAGGCCGGTGTGGGTGCGGCGGCACTGGTTGACGAGGGACGTGGAGGCGGCGTTCTCCGTGGTGATGGCGGCGGAGGAGGTGCGGTGCGTGGTGAAGGTCACGTGGGGCCGGAAGGACGGAGGGGAGGTGCACGTGAGGGAGGTGAACATGGTGATGGAGGACGCAGAGGGAGGGCACGTGAGGGGGAAGGAAGCAGTGGGTATTCTGCAGAGGGCGATGGAGAGTGGTGTGAGGAAGAGGGTGGTGGTGGATGGTGGTTGTGGTGGCGTTGATTCGGCAAAGGAGAGTTATGAGAGATTCTCTTGTATGGTGAAGGAGAGGAGGGAGAGGAAGCATAGGAGACATAAGGTGCGGGATGTTGCCTCTACTTTGCTGGCGTTTGTTGCTTTCCTCTTGTTTCTCTTCTTAATTTGCTGA 1056 0.5909 MAAVPLSLAPPEYAADHQNVAAPSCLSFITAVHPDIILAHILTRLDPATLATAASASSHLRRLCADEDLWQKICTATWPSLTDPTASHVISTFPAGHRSIFSDAFPSLHHNHSPSQPHRRLPSPPPPELISAVDIYYNGEPMFSRVHRTETEKNWFLTSPLCVEMLEPNEVVPAPVRFAGKYEKWMRHLEESLRLSWVVIDPTLKRAVNVSSRRPVWVRRHWLTRDVEAAFSVVMAAEEVRCVVKVTWGRKDGGEVHVREVNMVMEDAEGGHVRGKEAVGILQRAMESGVRKRVVVDGGCGGVDSAKESYERFSCMVKERRERKHRRHKVRDVASTLLAFVAFLLFLFLIC* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1003 351 PANTHER F-BOX PLANT-LIKE PROTEIN 28 347 - -
Lja3g1003 351 ProSiteProfiles F-box domain profile. 27 73 IPR001810 GO:0005515
Lja3g1003 351 SUPERFAMILY F-box domain 34 98 IPR036047 GO:0005515
Lja3g1003 351 PANTHER F-BOX PROTEIN-RELATED 28 347 IPR045283 -
Lja3g1003 351 Pfam F-box-like 34 75 IPR001810 GO:0005515
Lja3g1003 351 Gene3D - 17 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1003 Lja-Chr3 10305164 10306609 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1003 - - lja:Lj3g3v2987100.1 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1003 3 10305164 10306609 Lja3g1003 3 10305164 10306609 ECH
Lja3g3561 3 70626880 70628671 Lja3g1003 3 10305164 10306609 PCT