Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3549 ATGGGGAACACGAAGGAATGCGACCACCACAAGGGCCAGCGCGGCGAGCTCCACCGCCGCGTCTTCGCCGCCATCCTCGGCTTCATAGTCCTTGTCCTCCTCGTGATCTTCCTGATCTGGATCATCCTCCGCCCCACCAAACCCCGCTTCATCCTCCAAGACGCCACCGTCTTTGCCTTCAACCTCTCCTCCACCGGCGCCACCACCCCTTCCCTCACCACCCCCACCCCCAACACACTCACCCTCACCATGCAAGCCACCCTCACCGCCATCAACCCAAACTCCCGCATCGGCATTTACTACCAGAACCTCCACACCTACCTCCCACCTACCTACCAAGGCCACCGTGACGTCACCGTCTGGTCGCCGTACCTCTACGGGTACGCCGTGCCGGTGTCGCCGTTCATGCTGGATGTTCTGAGACAGGACCAGAGCGCAGGGGCGGTGCTGGTCAACGTGAAGGTCATCGGGAGGGTGAAGTGGAAGGTGGGGACTTGGGTTTCTGGGAGGTACCACATCTATGTGAACTGTCCTGCTTATATCAGGCTCGCCGGTGAGCGAGACAATGACGGTGGCGTTGGAATCTCCGGCGCCGGCGCGGCGGTGAAGTATCAGTTTTTTCAGAGCTGCGTTGTTGATGTTTAG 645 0.6031 MGNTKECDHHKGQRGELHRRVFAAILGFIVLVLLVIFLIWIILRPTKPRFILQDATVFAFNLSSTGATTPSLTTPTPNTLTLTMQATLTAINPNSRIGIYYQNLHTYLPPTYQGHRDVTVWSPYLYGYAVPVSPFMLDVLRQDQSAGAVLVNVKVIGRVKWKVGTWVSGRYHIYVNCPAYIRLAGERDNDGGVGISGAGAAVKYQFFQSCVVDV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3549 214 PANTHER OS05G0367900 PROTEIN 10 214 IPR044839 GO:0098542
Lja3g3549 214 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 10 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3549 Lja-Chr3 70457151 70457834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3549 - - pvu:PHAVU_005G120900g 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3549 3 70457151 70457834 Lja3g3549 3 70457151 70457834 ECH
Lja3g3549 3 70457151 70457834 Lja3g1021 3 10490132 10491103 PCT