Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1021 ATGTCCACAAAGGACTGTGGCCACCACGACGAGGGCCGCCAGATCCTCCGCCGCATCCTCGCCGCCGTGGTAGCCTTCATCTTCCTCATCCTCCTCATCATTTTCCTAATATGGATCATCCTCAGACCCACCAAACCCCGGTTCATGCTCCAAGACGCAACCGTCTTCGCCTTCAACCTCTCAACTCAACAACACACTCCTCCTCTTTTAACTCCCACACCAAACACTCTCACACTGACCCTCCAAGTCACGCTCTCTTCCCACAACCCCAACGCGCGCATCGGCGTCTACTACCACGCGCTCCACGTCCACGCCTCCTACCGGAGCCAACAGATCTCTCTCCCCACCGCCCTCCCCAACACCTACCAGGGCCACAAGGACTACGCCATCTGGTCGCCGTTTCTCTACGGCGCTGCCGTGCCGGTGTCGCCGTACACGCTCAACTCGCTGCAGCAGGACCAGGACGCCGGCGTGGTTTTGGTCAACGTTAAGGTCAACGGGAAGGTGAAGTGGAAGGTCGGGACCTGGATCTCCGGGAAGTACCACATCGACGTGAGCTGTCCTGCGTATTTCAGGTTCGCCGGAGATCACGGCGGTGGGAACGTCGGAGTTGTTGCTCCGGCGGTGAAGCTTCAGCTATTGCAGAGTTGCAGTGTTGATGTTTAG 666 0.5856 MSTKDCGHHDEGRQILRRILAAVVAFIFLILLIIFLIWIILRPTKPRFMLQDATVFAFNLSTQQHTPPLLTPTPNTLTLTLQVTLSSHNPNARIGVYYHALHVHASYRSQQISLPTALPNTYQGHKDYAIWSPFLYGAAVPVSPYTLNSLQQDQDAGVVLVNVKVNGKVKWKVGTWISGKYHIDVSCPAYFRFAGDHGGGNVGVVAPAVKLQLLQSCSVDV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1021 221 PANTHER OS05G0367900 PROTEIN 9 221 IPR044839 GO:0098542
Lja3g1021 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
Lja3g1021 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1021 Lja-Chr3 10490132 10491103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1021 - - gmx:100819285 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1021 3 10490132 10491103 Lja3g1021 3 10490132 10491103 ECH
Lja3g3549 3 70457151 70457834 Lja3g1021 3 10490132 10491103 PCT