Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3539 ATGGCCTCACCAATTGCTGACAAACCATGGGCTAAGTTAGTCAAGTTTGTTCAAAATGAACCCAGAAGGATTATTCATTCCTTCAAGGTTGGATTGGCACTGGTGCTGGTTTCCATTTTGCATCATTTTCGTCCCTCCTTCTATGGTTTTGGTGAGAACATCATCTGGGCGGTTGTCACTGTTGTCATTGTCCTCGAACTTTCTGTTGGTGCAACACTCGGAAAAGGTTTAAACAGGATGTTGGCAACAGGATTAGCTGCTGCTCTGGGGTTTGGAACCCATAGATTAGCATCTCTTTGTGGGAAGAATGGCAAAGATGTACTGATTTCAGCATTTCTCTTTGTGATTGCTGTGACAGTGACATATATGAGATTTTCGCCGCGATTGAAGGCGAAATATGATTATGGATTGCTGATATTCATCTTGACGTTCTGCTTGGTGACTCTTTCGGAATTTACAGACGGTGAACTCCTACGAACCGCGCATGAGAGGTTATTAACGATCATCATTGGAAGCTTGATTGCTATCGCGGTGTGTGTTTGCATTTACCCTATTTGGATTGGCGAGGATCTTCACAATCAGATTGCTGGCAACATTGTAAAAGTTGCAGACTTTTTGGAAGGATTTGGAGATGAGTACTTCAAAAATTCAGAGAATACAGAAGTTGTGGTTGTGGCTCACGACAAGCCATTTCTCCGCAGCTATAAAAGAGTCCTCTCTTCAAAAAGCGCTGAAGAAACAAAGGCTGTTTTAGCAAGATGGGAACCTTGTCATGGCCGATTCAGATTCCGCCACCCATGGAAGCAATACTTGAAGATTGGGAACCTAACACGGTTGTGTGCTTACAAAATTGAAGCTCTTAGTGTCTACCTCCTCAACTCTGACCAGACCCCATATGAACTTCGAAGCAGGGTTGAAGATCCATGCAAAAATATTAGCTTGGAATGTGGAAAAGCCCTCAAAGAATCATCACTGATAGTTAAAAAAATGGCCAAGTCATCAGCACCAAACCTCTATGTTAGACATGCTAAAAATGCTGCTGAGTCTCTTAAATCGGTTCTAAGAGCAAACCCATGGGAAGGAGCTGATCCAATGGAGATGGTGCCAGCTGCTACGGTGGCATCACTGCTAATAGACATTGTTATTTGTGTTGAGAACATTTCTGAAGCTGTTGATGAACTAGCAACCCTCGCAAATTTTGTGCCTCCTCGGGGAATAGTGCAACCAATTACTAGTTCTGATGATGATGATTCGGCTCATGTTATCACAGTTAACGAGTGA 1281 0.4301 MASPIADKPWAKLVKFVQNEPRRIIHSFKVGLALVLVSILHHFRPSFYGFGENIIWAVVTVVIVLELSVGATLGKGLNRMLATGLAAALGFGTHRLASLCGKNGKDVLISAFLFVIAVTVTYMRFSPRLKAKYDYGLLIFILTFCLVTLSEFTDGELLRTAHERLLTIIIGSLIAIAVCVCIYPIWIGEDLHNQIAGNIVKVADFLEGFGDEYFKNSENTEVVVVAHDKPFLRSYKRVLSSKSAEETKAVLARWEPCHGRFRFRHPWKQYLKIGNLTRLCAYKIEALSVYLLNSDQTPYELRSRVEDPCKNISLECGKALKESSLIVKKMAKSSAPNLYVRHAKNAAESLKSVLRANPWEGADPMEMVPAATVASLLIDIVICVENISEAVDELATLANFVPPRGIVQPITSSDDDDSAHVITVNE* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3539 426 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 9 407 - -
Lja3g3539 426 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 9 407 - -
Lja3g3539 426 Pfam Aluminium activated malate transporter 15 395 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3539 Lja-Chr3 70269655 70274618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3539 18 424 Miscellaneous Gene Families AT1G08440 44.844 1.05e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3539 - - lja:Lj0g3v0326249.1 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3539 3 70269655 70274618 Lja3g1028 3 10579439 10581933 PCT