Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1028 ATGGAATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGCTTGGTAGAGCATGGGAACATGTAAAGGCTTTGCCTGAAGTCCTTAGGAAGAAAGTGTGGGGCATTTGTAAGATGTCAAAAGAGGTAGCCCAAGATGATCCTAGAAGAGTTATTCATTCACTAAAAGTGGGACTTGCAATCTCACTAGTGTCTCTATTCTACTACTATCAACCACTATATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTTGTAGTTGTTTTTGAATACACAGTTGGAGCCACTCTTGGAAAAGGTTTGAATAGGACAATGGCAACTCTAGCAGCTGGTGCTCTTGGCGTTGGGGCTCATTACCTAGCTAGCCTATCTGGGGAAACAGGGGAACCAATATTGATTGGCTTCTTTGTATTTGTACAAGCTGCTATAGCATCATTTATAAGGTTTTTCCCCAAGGTGAAGACAAGATATGATTATGGGATTCTTGTATTCATCTTGACATTCTCTTTGATATCTGTATCTGGATTTCGTGATGATGAAGTATTGGAAATGGCACACAAGAGGCTATCAACCATTTTTATAGGGGGTTCTGCTTGTGTAATGATCTCCATTTTTGTTTGTCCTGTGTGGGCTGGGGAAGAATTCCACTATTCCATTGCTGAGAAGTTGGAAATCCTTGGTGACTTCTTAGAAGCATTTGTAGATGAGTACTTCACAACATCAAAGGAAGGAGATTCTAAAGATAACAAGTCTTTCCTTGAAGGTCATAAAAGCATTCTCAATTCCAAAAGTTCTGAAGAGGCTCTGGCCAATTTTGCAAGATGGGAACCAGGTCATGGCAAGTTCAAATTTCGTCACCCATGGAGTCAATACCTCAAAATTGGTGCCCTTTCTCGCCAATGTGCATATAGAATGGAGGCTCTAAAGGAACTCCTCAATTCTAATACACAAGGATCACCAGAAATCCATTGTACAATCCAAGAACTGTGCTCAGAAATGAGTTTGGAATCAAGCAAAGCTTTGAAGAAACTAGTAGTATCAATCAGAACAATGACCATGGCATCTTCTGCCGATATCCACATTGCAAACTCAAAAGCTGCACTGAAGAGCCTCAAATCATTGCTCCAATCAAACTTATGGAAAGAAACAGACCTTTTCTCACTTGTGCAACCAGTAACAGTGGCTTCACTGCTAATTGATATTGTTGAGTGCACAGAGGAAATAGCAGATTCAGTGAATGTTCTCGCTTCCATTGTGGATTTTGATGTTGAAGATGCAGATGAAAAATCTCCCAAGACATCACAATCTCCAAACTCTGAATGTGCTAAGAATGATAATAACCCCCATGTCGTTATTCTTATTGAGGAGCCAGTTTTGTCTGATTGTGGAAAAACAACATCTGATCAACATAAGTAG 1422 0.4044 MESPNTNQEKAGVLGRAWEHVKALPEVLRKKVWGICKMSKEVAQDDPRRVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTMATLAAGALGVGAHYLASLSGETGEPILIGFFVFVQAAIASFIRFFPKVKTRYDYGILVFILTFSLISVSGFRDDEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAEKLEILGDFLEAFVDEYFTTSKEGDSKDNKSFLEGHKSILNSKSSEEALANFARWEPGHGKFKFRHPWSQYLKIGALSRQCAYRMEALKELLNSNTQGSPEIHCTIQELCSEMSLESSKALKKLVVSIRTMTMASSADIHIANSKAALKSLKSLLQSNLWKETDLFSLVQPVTVASLLIDIVECTEEIADSVNVLASIVDFDVEDADEKSPKTSQSPNSECAKNDNNPHVVILIEEPVLSDCGKTTSDQHK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1028 473 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 6 434 - -
Lja3g1028 473 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 6 434 - -
Lja3g1028 473 MobiDBLite consensus disorder prediction 428 448 - -
Lja3g1028 473 Pfam Aluminium activated malate transporter 41 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1028 Lja-Chr3 10579439 10581933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1028 30 419 Miscellaneous Gene Families AT1G08440 58.270 1.32e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1028 - - aprc:113859727 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1028 3 10579439 10581933 Lja3g1028 3 10579439 10581933 ECH
Lja3g3539 3 70269655 70274618 Lja3g1028 3 10579439 10581933 PCT