Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3523 ATGGAGTTTCAGTTTCATCCAAAATTCTACCATCTTTTATGCTTATTCATCCTCTTCCATCAATCCTTTCGTGCTCAAGCTGCTAACTTCAGATATTGCGCTGATGTAAACTATGCTGTGAAGGTGTCTGAAGTTGAAATTACACCAAACCCTGTTGTGCGTGCAAGACCAACTACCTTTAAGATTTCAGCTGTTACTGGTGAAGCTATTTTTGGTGGGAAGTGGGTGATTAAAGTTTCATACATTGGAATACTTGTCCATCAAGAAGTTCATAATCTTTGTGAGGAAGTATCCTGTCCTGTTACTGCTGGCGATTTCGTGGTTGCTCACACCCAGAAGTTGCCTGTATTTGCCCCGCCGGGATCCTACACTGTGGAGATGAAACTAAAGAATGAGGAGAATGAGCCATTAACTTGCATCACCTTTAAATTGAAAATTGGTTTTGGATCTTCTGTGTCTGAAATCTGA 468 0.4081 MEFQFHPKFYHLLCLFILFHQSFRAQAANFRYCADVNYAVKVSEVEITPNPVVRARPTTFKISAVTGEAIFGGKWVIKVSYIGILVHQEVHNLCEEVSCPVTAGDFVVAHTQKLPVFAPPGSYTVEMKLKNEENEPLTCITFKLKIGFGSSVSEI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3523 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 7 151 IPR039670 -
Lja3g3523 155 CDD PG-PI_TP 30 143 IPR033917 GO:0032366
Lja3g3523 155 SUPERFAMILY E set domains 27 146 IPR014756 -
Lja3g3523 155 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 7 151 - -
Lja3g3523 155 Pfam ML domain 29 146 IPR003172 -
Lja3g3523 155 SMART pgtp_13 30 144 IPR003172 -
Lja3g3523 155 Gene3D - 27 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3523 Lja-Chr3 69923963 69926015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3523 - - gmx:100818265 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3523 3 69923963 69926015 Lja3g1041 3 10802240 10806821 PCT