Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1041 ATGGAGTCTCAGTTTCTTCCCAAGCTCTACCTTGTTCTCTCCTTATCCATCTTCTTCCTTTCATCTTCTCTCGTTCAAGCTAAAGTTACCTTCAAATACTGCGATAAGAAGGCAGACTATGCTGTCAAGGTGACTAACATTGAAATATCACCAAACCCAGTAGTCAGTGGCGACCCGGCCACATTTAAGATCTCAGCTACTTCTGGACAAGCTATTGATGGTGGAGAGCTGGCAATTGGAGTATCATATGTTGGAGTGCCTGTCCATACTGAAAAATTTGATATTTGTGATAAAGTATCCTGCCCAGCTAAGGGCAATTTTCTGATTCCTCACACCCAAACATTGCCTGCATTTACTCCACCGGGACCCTATTCTCTGAAGATGACACTCGACAATGATAAGGGTGAGCTCTTAACTTGCATCAAGTTTAATTTCAAAATCGTTCTCGGCGGATCTCTTGTGTCTGATATGTGA 474 0.4283 MESQFLPKLYLVLSLSIFFLSSSLVQAKVTFKYCDKKADYAVKVTNIEISPNPVVSGDPATFKISATSGQAIDGGELAIGVSYVGVPVHTEKFDICDKVSCPAKGNFLIPHTQTLPAFTPPGPYSLKMTLDNDKGELLTCIKFNFKIVLGGSLVSDM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1041 157 SUPERFAMILY E set domains 28 148 IPR014756 -
Lja3g1041 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 8 152 - -
Lja3g1041 157 Pfam ML domain 29 147 IPR003172 -
Lja3g1041 157 Gene3D - 27 149 - -
Lja3g1041 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 152 IPR039670 -
Lja3g1041 157 CDD PG-PI_TP 31 145 IPR033917 GO:0032366
Lja3g1041 157 SMART pgtp_13 31 145 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1041 Lja-Chr3 10802240 10806821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1041 - - gmx:100500637 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1041 3 10802240 10806821 Lja3g1041 3 10802240 10806821 ECH
Lja3g3523 3 69923963 69926015 Lja3g1041 3 10802240 10806821 PCT