Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3495 ATGACTTGGAAAAGCAGAGGAGAGTTGCTTCACAGAAGCACCATGACAAAGAAATGTGTGATTTTCCTCTGTATTGGAAGCTTCTGTGCTGGGATGTTCTTCACCAATAGGATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAACAGCTACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGGTTGTAATTCCAGAATTTTGCAAGAGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAAACCCTGGACAAGACTATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCTCCTGTATCAGAAGATATCAAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTTCAGCAGCCGGAAAAGAAGAGACTCGGTTCGTCAAACATGGATGCCATCAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTGTCATCCGCTTTGTAATTGGTCATAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATCAGAAGCATGGAGATTTCCTAAGGCTGGATCACGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAAGATCTACTTTGCCACTGCTGTTAACTTGTGGGATGCTGAATTCTATATCAAAGTTGATGATGATGTTCATGTAAATATAGCTACACTTGGACAAACTTTAGTTAGACACAGAAGAAAACGGCGGGTTTACATTGGATGTATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGTACTTCCGTCACGCCACGGGACAGTTGTATGCCATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGAAGGTTCTTCACAAGTATGCCAATGAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGACCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGTGCCACATTCTAG 1212 0.4389 MTWKSRGELLHRSTMTKKCVIFLCIGSFCAGMFFTNRMWTIPEPKGLARTTATEAEKLNLVSEGCNSRILQEKEVKRETKGIFKTSNAIQTLDKTISNLEMELAAAKAAQESIRSGAPVSEDIKMPESSGKRRYLMVVGINTAFSSRKRRDSVRQTWMPSGEKRKKLEEEKGIVIRFVIGHSATSGGILDRAIEAEDQKHGDFLRLDHVEGYLELSAKTKIYFATAVNLWDAEFYIKVDDDVHVNIATLGQTLVRHRRKRRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNRYFRHATGQLYAISKDLAKYISLNQKVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWSATF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3495 403 Coils Coil 89 109 - -
Lja3g3495 403 Pfam Domain of unknown function (DUF4094) 17 108 IPR025298 -
Lja3g3495 403 PANTHER HEXOSYLTRANSFERASE 7 395 - -
Lja3g3495 403 Pfam Galactosyltransferase 148 345 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja3g3495 403 Gene3D - 129 348 - -
Lja3g3495 403 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 395 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3495 Lja-Chr3 69152844 69157463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3495 1 403 Glycosyltransferase AT1G05170 77.396 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3495 K20855 - gmx:100793931 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3495 3 69152844 69157463 Lja3g1078 3 11195534 11199704 PCT