Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3491 ATGAGTTCAGAAAACAAGAATGATGCAGGTGATGAAGTACTTCCCCTGTTACCACACTCCTCCTCAACCTCTAAGCATGCCTCCGACGGCGAGCTTGAGAGAATTCTCTCCGACACCGCCGTGCCCCTCCTCACCCGCCTTGGCGCCGCCACCTGGATCGAGCTCAGGCTCCTCTTCCACTTGGCCGCCCCTGCTGTCCTAGTCTATTGCATCAACTATGTCATGTCCATGTCCACCCAAATCTTCTCCGGCCACCTTGGTAACCTTGAACTCGCCGCCGCGTCGCTCGGTAACACCGGCATCCAAGTCTTCGCTTATGGCCTCATGTTGGGTATGGGAAGTGCTGTGGAGACGCTATGTGGACAAGCATTTGGTGCTCACAAGTTTGAAATGCTTGGAATTTACTTGCAGAGATCAACCATCCTTCTCTTTCTTGCTGGATTGGTTTTGACGTTGATATACGTTTTTAGCGAACCCATTCTACTTTTTCTCGGAGAGTCCCCACAAATTGCATCCGCGGCCGCGCTTTTTGTGTGGGGCCTCATCCCTCAAATCTTTGCGTACGCTGTGAATTTTCCCATCCAGAAGTTCCTTCAGGCGCAGAGCATAGTCGCGCCTAGCGCGTACATTTCAGTTGTCACGTTGGTGTTGCACCTCTTGCTGAGCTGGGTGGTGGTTTACGAGATTGGACTGGGCTTGTTGGGCGCGTCGCTTGTTTTGAGTTTATCATGGTGGATTATCGTGATTGCGCAGTTCGTGTACATATTGAAGAGCGAGAGGTGCAAGCGCACATGGCAAGGGTTCTCGTGGCAGGCATTTTCAGGGTTGCCAGAGTTTTTCAAACTATCGGCAGCGTCTGCTGTGATGTTGTGCCTAGAGACATGGTACTTCCAGATTTTGGTTTTGTTGGCGGGACTGCTTCCTCATCCAGAGTTGGCTCTTGATTCCCTTTCCATTTGTACCACAATTAGTGGGTGGGTGTTCATGATCTCTGTTGGATTCAATGCAGCTGCAAGCGTGAGAGTGAGCAACGAACTAGGAGCAAGAAATCCAAAATCAGCCTCATTTTCGGTGGTGGTGGTGACATTAATTTCGTTCATAATATCAGTTATTGCATCACTGGTGGTGCTTGCATTACGAGATATCATTAGTTATGCCTTCACAGGGGGTGAAGAGGTTGCTGCTGCAGTCTCAGATCTTTGCCCACTGCTAGCACTTTCTATTCTCCTCAATGGCATTCAGCCTGTCTTGTCAGGCGTGGCTGTTGGATGTGGATGGCAAGCTTTCGTGGCATATGTAAACGTGGGTTGTTACTACGGTGTTGGTATTCCATTGGGCTCTGTTCTGGGCTTTTATTTCAAATTTGGAGCCAAGGGTATATGGTTGGGAATGCTTGGTGGCACAACCATGCAAACAATTATTCTAATGTGGGTCACATTTCGAACGGATTGGAACAAGGAGGTAGAGGAAGCAGCCAAGAGATTGAACAAATGGGAGGAAAAAACGGAGCCACTTCTAAACTGA 1524 0.4921 MSSENKNDAGDEVLPLLPHSSSTSKHASDGELERILSDTAVPLLTRLGAATWIELRLLFHLAAPAVLVYCINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAFGAHKFEMLGIYLQRSTILLFLAGLVLTLIYVFSEPILLFLGESPQIASAAALFVWGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISVVTLVLHLLLSWVVVYEIGLGLLGASLVLSLSWWIIVIAQFVYILKSERCKRTWQGFSWQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARNPKSASFSVVVVTLISFIISVIASLVVLALRDIISYAFTGGEEVAAAVSDLCPLLALSILLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGIPLGSVLGFYFKFGAKGIWLGMLGGTTMQTIILMWVTFRTDWNKEVEEAAKRLNKWEEKTEPLLN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3491 507 TIGRFAM matE: MATE efflux family protein 64 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g3491 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 494 - -
Lja3g3491 507 PANTHER PROTEIN DETOXIFICATION 20 494 - -
Lja3g3491 507 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g3491 507 CDD MATE_eukaryotic 54 490 IPR045069 GO:0042910|GO:1990961
Lja3g3491 507 Coils Coil 481 501 - -
Lja3g3491 507 Pfam MatE 286 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g3491 507 Pfam MatE 64 224 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3491 Lja-Chr3 68879946 68886715 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3491 K03327 - gmx:100801718 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3491 3 68879946 68886715 Lja3g3491 3 68879946 68886715 ECH
Lja3g3491 3 68879946 68886715 Lja3g1087 3 11291053 11297478 PCT