Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3400 ATGCAACAAAACAGAAAGCCGGCAACGGCGAAACCCGCCGGTATCATCAGCCCTCAGTATTGTTCTCCGTACAATGTTGACCTTGCAGTTGTGAGGAAAGTCACGGCACTAGCTGATAACTTCTCCGTCATCAATGTTAATGGCAAAGTAGTTTTCAACCTTCAGGCCTCTCTCATGTCCATCAATGATCACCGTGTCTTGCTAGACGCCGCCGGAAAACCTATCGTCACGCTGCGCCAGAAGATAATGACAACACATGATCGATGGCAAGCTTTTCGGGGTGAAAGCACACAGCCAGAAGATTTAATCTTTAGTGTAAAGAGACCATCCATGTTCCAAGTAAAGACCAAATTGGAGGTGTTCTTAGCTAACAATACCAGAGAACAAGTTTGTGACTTTAAGATCAAAGGAAGCTGGTTCGAGCGATCTTGTGTTGTTTATGCTGGTGAATCTCTTACCATTGTTGCCCAGATGCATAAGAAGAACACAGTTCAAAGTGTAGCCATTGGGAAAGATAGTTTCATGCTCACAGTGTATCCCAACAATGACTATGGATTCATAGTGGCACTGATTCTAATTCTTGACGAAATCAACCAAGACAAGAGACGGCAAGCTCAGAATTGA 624 0.4407 MQQNRKPATAKPAGIISPQYCSPYNVDLAVVRKVTALADNFSVINVNGKVVFNLQASLMSINDHRVLLDAAGKPIVTLRQKIMTTHDRWQAFRGESTQPEDLIFSVKRPSMFQVKTKLEVFLANNTREQVCDFKIKGSWFERSCVVYAGESLTIVAQMHKKNTVQSVAIGKDSFMLTVYPNNDYGFIVALILILDEINQDKRRQAQN* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3400 207 Gene3D - 13 204 IPR038595 -
Lja3g3400 207 Pfam LURP-one-related 16 193 IPR007612 -
Lja3g3400 207 PANTHER TUBBY C 2 PROTEIN 7 203 - -
Lja3g3400 207 PANTHER - 7 203 IPR007612 -
Lja3g3400 207 SUPERFAMILY Tubby C-terminal domain-like 15 198 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3400 Lja-Chr3 67083552 67084990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3400 - - gmx:100527088 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3400 3 67083552 67084990 Lja3g3400 3 67083552 67084990 ECH
Lja1g3296 1 40947641 40950631 Lja3g3400 3 67083552 67084990 PCT