Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3397 ATGCCGCTCTCGAAGTACCTGATACGGAACGAGTATGGCTTGGCGGATCCCGAGCTCTACCGTGCCGCCGACAAAGATGATCCTGAAGCTCTTCTTGAAGGCGTCGCCATGGCTGGTCTCGTTGGACTCCTGCGCCAGCTCGGTGACCTTGCCGAGTTTGCTGCTGAGATCTTCCATGATTTACATGAAGAAGTGATGGCTACTGCTGCAAGAGGCCATGGTCTTATGTCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTTGAGAAAGCTTTTTTCTCTCAAACTCATCATTCATCATTCTTCACTAATGGAGGGATTGATTGGCATCCTAATCTTCGGTCTGAACAAAACCTTGTTACTCGTGGAAACTTTCCTCGACTGATAATGGATTCATATGAAGAATGTCGTGGTCCCCCGAGACTATTCCTTCTGGATAAGTTTGATGTGGCTGGCGCTGGGGCTTGTCTGAAACGTTATACCGATCCATCATTCTTTAAAGTGGAACCAGCTTCATCTGTTAGGGCTACAGTAGATGTCCACAGGGAAAAGAGAATTCGTAAATTCAAGCAGAAGAAAGGAGCACGGTTGAGGGATGGTGAAGCCCCTAATGTTGTACCAACACATTCAAAATTACACCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTATAGCAATCCTGCACGTCTAGTGAAGTTGAAGAAAAGACAATTTAATGGACCTACAGTTGACGCAAAAGCTGGGAAAAGTTACATGGAGAAATTTCTGGAAACTCCCTCACCTGATCATAAGATGATCTGTGAAACTTCTATCTTTCCGCTGCCTGTGGAACCGACTTCGGATGATACTACTGAAGCGAGGATTAAAATTCTTGAAATCAGTAGCTTTAATCCTGTAAAGAAGTCATTGAGAAATGAAAATAACCGTTCATCACCTAATGAACAGGAAAAACTTGAATTAGAACTAAAACCATTTTCAAAAGTGGGTGGTGAGACAAATAGAGATATTGTAAAGGTGAAAGAACCAGCTGGTGTGGCAGCAGATGAAATGTCTTATATTCATCTCAAGTTGCCTGATGAGGTAAAAATGGCAATCAGTGAACGTAAGAAGATAGAAGGCAGCTTAGATGGGTACCATTCTGATGACGTGACTAGTGAAGTTGACAATTACTTGGATGCATTAACTACCATGGAGTCAGAATTGGACACCGACAATGAGTATAAACCCAAGAAAAAATTCTTGAATATTCAAAAGATAGTAGATATCAATGATAAAGAACAACAACTGCAAGCTCGACTTTCAGATTCTCAATCATTTGGAGACTCCTCAACATCAGATGACATTAGTTCATTCAAACAAGATAGAAATGAAGAACATATAGAAGTGCAAGCTCAGTCATCAGATTCTCACTCAACTGGATCCTCCTCTATATCAGACAATAATGGCTCATTCAGAAGAGAGCGAGAAGAGCATATAGAACTGCAAGCTCACTTTTCAGATTCTCGATCTATTAGAAACTCCTCTTCATCAGAAGAAAATATTTCATTCAAAAAAGACAGGTCATATTTCCCTCACTTTGATTCATCAAGCACTGTGGTCGAAAATGTACAATCAGAACCTATGTTCACAAAAACAAATAATTGTGAACCGGAGATTGATGATACAAAATCCATCCAATTTCCCCAAATTGCTGAGTTTCAAAACACAGATTGTGGGATATTTGTCATGCATGATAATACACATACTCAAGAAGGAGAGATATCTGATTCTGTGCGGGCCTCATCTGATCTGATAACTTCAGGACTAGTGTTGTCTTCTGATCTTGGACCTGCCTCACCTGTGGTCCTACCTGCAGGGACCCAATCAGATGAAACTTCACCTGACCCTATTGAACTTAATTCAAGATTAGAGAATGATGCGGACAAAAATGCACATGTTGAATCTATTGCTTCTGAACCTGTTTCTCTCTCCCCAATAGAAGATGATGATTTCGCTGTGGATTCTCCTGATAAAATTTCATCAGGCAAATTGGATGGTTATGATGATCCTGTTATTCATTCTGATGATTCATTACAAGTTTCCAATGATTTAGCATTAGCTCATGGAGATGAACATTGTGATGATTCTGTAATCAAAATTCTCCAAGCACAATCTCCTGAAGAAAATTCTTCTAAAATTTCGGTTTGTAGAGATATTAGTTCACAAGGAGATGATCCTATTTGCCCGTCCATGGAAGAATTAGACATGGATTCAAGTATCACTGTGGCGCTTGATTGTCAAGGCTCAAAAGATGAGGGTTCTATTATGGCACACCAAGCTGATTTGGAAGATTTATCTCCTGCTGTCGAGGTTCCTCAAGTGAGTTGCTTTACTAGAGAGCCATTTTCTGATTTGACTTGCAATAATCCACAGGATGTACCAGGCTCAGCAGAACTGGAAGTTTCAAATTCTGGTCTGCAATCAAATTTTGAAGAGATGCCAAAAATGGGGCGTAGTGATGAAATAAATGGATCCACCCGCGATGTTGATCCAGTTGATGGTGATGGTTGTTTTAAGTGTCCATCTGTTGACAATCATGTGATCGTAAATGGTGTGGTTACCGAAATTGTTCAGTCAGAAGATCAGGCTGTATATTCAGTTCCTTCTGTTGATACTGATGAAAATGACTCGGGCGTTGGTGCTTGTCCTGCTTCAGGTCTGATTTCTGCTCCATCAACGAGTTTTTCAAATTCGCAAGAGCCAGTGTTAGGTTCGTCAAATTCTTATCAGATGGAAATTGAATCCCAAACAGTAGAAGAGTCTATTTCTGATTTTGCTGATCCACATAAGAAAGAGATTGATGTCAATGATGCAGTTGCTAGGGAATCTTTGACAGAACTAGATGGAACGAAGACAGTGGGTCATCTAGAAATTGCTTCTCCTGATGCACCATTGAACTCAAACAATCTGGTTCCCGGTGATCTTTCAGATTCAGGAATATGTGATGATATTCAAAAGTCATCTCCAAGGGAGAAACTCCAACACAGTGATTTTGTTGATGATGCAAAAATGGCGCCTGAATATTCAGGGTTAGACACTCATCTGTCAGGACCTATATTTTGTGGCCAGAATGGTCTTTTACAGAATGGCAGAGATAGCGTCTCATCACCTTCTCATAACCAGCTGGATTCTCTGACTGACTTAGAACCGTTCTCACAATCTCAAGTTGGTGAACAGAATGCAAAATTTCTGATCAGAAATGACGAAAACTTCACCTCTGAGAAGTCTCAATATCAGAAGATGCAGATATATCAATTGGAGCAAGAAGACACTCGTGCTACTTCTGAATCTGTTTCTGAAATCCATGAAGATGAGCCATCATCATTTTATTCCATACCAGATAAGGCAACTGAAAACAATCTGGATCAGATGCCCCCTATGCCCCCGTTACCACCAATGCAATGGAGAATGGGGAAGTTTCAACATGACTCCCTGGATTTACAGAGAGAATTAGAACCAAGTCAGGCTTCAGTCCAACCAATGCAGCCAATTAAACCTGATATGAATACTCAATTTAGTTTGCCGTCTCCTGAGAGTACCTTGCTGTATCAGACTCCATTTTTTCCTGTGATGGCTGTAGAAAATGATAAGCTCCAACATCCTTCTGTGGATGTTTCAGGGAATCCTGTTGCTGTACCTTTACAACTTCCTCTCATGGTTAATGATGCAAAAGGTCAATATAATTACGTAGTGCTGGACAGAAACCAAATTCAGAACCCCTTCTTGACATTACCTGTGGTATCTACCGGCATGCCTTCACATGGCTACACTGTTGCTTCTGAGGGAGAAATGATCCACACATCAAACCTGTACTCCCCAATACTGCCTGCTGCATATGCTGTATCCGGTCATGATTCCACCGCTCCACATGAGAAACCAATTCAACCTCCAAGTCAATTAATGAGAGAGACTAGTTCAGATGATAAAACACTTCAGCAGTCTATAGGTAATGTGGTATCTAGGGGTTCGCCTCAAGAGAGTCAAATTATTGCTTCTTATGGAGAAACGGTAGATAATTCAAACCCATGCCCTCCAATACCCCTTGCTGAATGTTCTGTTTCTGGATATGAGTCCATCTCTCCTCAAGAAAAACTGATTCAATCTCCAAGTGAGTTAATGATGGACTCCAGTTCAGATGATAAAACAGTTTCACAGTCTATAAGTGATGTGATATCTGTGGACAGGCCTCAACACGTTGCTTCTGAGGGAATAATGCTACAAAATTCTAAGGCATGCCCTCCTACACACTCTGCTGGATGTGCTGTTTCTGGACATGATTCCATCTCTCCTCAAGATGAACTGACTCAGCTTTCTAATCAATTAGTGACGGAGACTAGTTCAGAAGTTAAAACACTTCATCAGCCTATGAGTAGCGTGGAAGGGGAAGAAGGACGTCCGTGTATGTCACTCATGTCAGCACCAAACATGGGAAGTATGGAGCTTAATCAGAGTTTCCTGCCCTTTGAGGGGGAAATGGTATCGTCCTTAGACACATCAGATTTTGATAGTGAAAGGACAAATGGAAAACCGAAGAATAAGCTTCCCCGTCCTCGGAGTCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAGAGCTACTGAACGGGTTATGCCTCAAATAGCTCCAAAGCTAGATGAAAGAGATTCATTGTTAGAGCAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGGCGACACGACCTAGCATTCATGGTCCGAAAACAAATTTGAGGGTAGCTGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTAGCTGGAAGTGATGAAGATGATGATGATAGTTGGAGTGATTCTTGA 4884 0.4152 MPLSKYLIRNEYGLADPELYRAADKDDPEALLEGVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHGLMSRVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLRSEQNLVTRGNFPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKVEPASSVRATVDVHREKRIRKFKQKKGARLRDGEAPNVVPTHSKLHQLLLEERIENGYSNPARLVKLKKRQFNGPTVDAKAGKSYMEKFLETPSPDHKMICETSIFPLPVEPTSDDTTEARIKILEISSFNPVKKSLRNENNRSSPNEQEKLELELKPFSKVGGETNRDIVKVKEPAGVAADEMSYIHLKLPDEVKMAISERKKIEGSLDGYHSDDVTSEVDNYLDALTTMESELDTDNEYKPKKKFLNIQKIVDINDKEQQLQARLSDSQSFGDSSTSDDISSFKQDRNEEHIEVQAQSSDSHSTGSSSISDNNGSFRREREEHIELQAHFSDSRSIRNSSSSEENISFKKDRSYFPHFDSSSTVVENVQSEPMFTKTNNCEPEIDDTKSIQFPQIAEFQNTDCGIFVMHDNTHTQEGEISDSVRASSDLITSGLVLSSDLGPASPVVLPAGTQSDETSPDPIELNSRLENDADKNAHVESIASEPVSLSPIEDDDFAVDSPDKISSGKLDGYDDPVIHSDDSLQVSNDLALAHGDEHCDDSVIKILQAQSPEENSSKISVCRDISSQGDDPICPSMEELDMDSSITVALDCQGSKDEGSIMAHQADLEDLSPAVEVPQVSCFTREPFSDLTCNNPQDVPGSAELEVSNSGLQSNFEEMPKMGRSDEINGSTRDVDPVDGDGCFKCPSVDNHVIVNGVVTEIVQSEDQAVYSVPSVDTDENDSGVGACPASGLISAPSTSFSNSQEPVLGSSNSYQMEIESQTVEESISDFADPHKKEIDVNDAVARESLTELDGTKTVGHLEIASPDAPLNSNNLVPGDLSDSGICDDIQKSSPREKLQHSDFVDDAKMAPEYSGLDTHLSGPIFCGQNGLLQNGRDSVSSPSHNQLDSLTDLEPFSQSQVGEQNAKFLIRNDENFTSEKSQYQKMQIYQLEQEDTRATSESVSEIHEDEPSSFYSIPDKATENNLDQMPPMPPLPPMQWRMGKFQHDSLDLQRELEPSQASVQPMQPIKPDMNTQFSLPSPESTLLYQTPFFPVMAVENDKLQHPSVDVSGNPVAVPLQLPLMVNDAKGQYNYVVLDRNQIQNPFLTLPVVSTGMPSHGYTVASEGEMIHTSNLYSPILPAAYAVSGHDSTAPHEKPIQPPSQLMRETSSDDKTLQQSIGNVVSRGSPQESQIIASYGETVDNSNPCPPIPLAECSVSGYESISPQEKLIQSPSELMMDSSSDDKTVSQSISDVISVDRPQHVASEGIMLQNSKACPPTHSAGCAVSGHDSISPQDELTQLSNQLVTETSSEVKTLHQPMSSVEGEEGRPCMSLMSAPNMGSMELNQSFLPFEGEMVSSLDTSDFDSERTNGKPKNKLPRPRSPLIDAVAAHDKSKLRRATERVMPQIAPKLDERDSLLEQIRTKSFNLKPAVATRPSIHGPKTNLRVAAILEKANAIRQALAGSDEDDDDSWSDS* 1628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3397 1627 MobiDBLite consensus disorder prediction 450 466 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 1511 1534 - -
Lja3g3397 1627 Gene3D - 104 208 - -
Lja3g3397 1627 Gene3D - 1527 1626 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 620 634 - -
Lja3g3397 1627 Gene3D - 1 90 - -
Lja3g3397 1627 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 520 - -
Lja3g3397 1627 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1344 1627 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 666 683 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 611 636 - -
Lja3g3397 1627 PANTHER WASP-1 544 1322 IPR028288 GO:0005856|GO:0030036
Lja3g3397 1627 PANTHER WASP-1 1344 1627 IPR028288 GO:0005856|GO:0030036
Lja3g3397 1627 MobiDBLite consensus disorder prediction 1313 1339 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 431 486 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 1108 1124 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 431 449 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 1298 1339 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 651 683 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 1107 1127 - -
Lja3g3397 1627 ProSiteProfiles WH2 domain profile. 1565 1583 IPR003124 GO:0003779
Lja3g3397 1627 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 544 1322 - -
Lja3g3397 1627 MobiDBLite consensus disorder prediction 467 483 - -
Lja3g3397 1627 PANTHER WASP-1 1 520 IPR028288 GO:0005856|GO:0030036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3397 Lja-Chr3 66977364 66985963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3397 - - gmx:100793542 1982.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3397 3 66977364 66985963 Lja3g3397 3 66977364 66985963 ECH
Lja1g3311 1 41173617 41181944 Lja3g3397 3 66977364 66985963 PCT