Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3311 ATGCCGGTCTGCAGGTACCACATTCGGAACGCGCAATGCCTGGCGGATCCGGAGCTCCGCCGTGCCGCCGGAAAAGATGACTCTGAGGCTCTTCTTGAAGCCGTGGCTGTGGCTGGACTCGTCGGATTCTTGCGTCAGCTCGGCGATCTTGCTCAGTTTGCTGCTGAGTTATTCCATGACTTGCATGATGAAGTAATGGCTACTGCTGCTAGAGGCCACAACCTTATTTCTCGTGTTCAACAGCTTGAGGCTGAAGTTCCTGCAATTGAGACAACTTTTTTGTCGCAAACTCATAATTTCTCATTTTTAACAAATGGAGGGATTGACTGGCACCCTAATCTTCAGTCTGAACAGAAACTTGTTACACGTGGAGACTTACCTAGATTCATAATGGATTCATATGGAGAATGCCGTGGTCCCCCTAGACTCTTCCTTCTGGACAAGTATGATGTGGCTGGTGCTGGGGCTTGTTTGAAGCGTTATACTGATCCATCATTCTTTACAGAAGACTATGCTTCCTCTGTAACAAAAACTACTGAAGTAGTTCACAGGGAAAAAAGAATTCGTAAAGTCAGGATGCAAGGAGCGGGATCAAGGAATGGTGAAACCCCTGAAGTTTTACCATCACATACAAAACTACATCAGTTGTTTCTTGAGGAGCGTATTGAGGATACTTGTAGTGATCCTGCTCGTCTTGTGAAGTTGAGAAAAAAACAATTGGATGGATATGCTGTGGAAGCAAAAAGTGGGAGAAGTTACATGGAGAAAATTCTGAAAATGCCCTCACCAGACTATAAAATGGTTTATGAAACTTCGATTGTTCCACAGCCTGTGAAATTGATGTCAGATGATACTAGTGAAACTAGGATTAAAATACTAGAAATCAGTAGCAATGCTCCTCGGAAAAGGTCTTTGGGAAATGATAACACACATTCTTCATGGATTGAGCAGGAATCAGAACTGAATCCATACTCAGAAATGGATAGGGAGACAAATAGATATCTTGGGAAGGAGCATGATCAAATCTCTGCCAGTGTCACAAATGAAATGTCTTCTAATAATCTCAAATTACATGATGAGAAAGAATTGGTTGCTGATGAACAAGAGAAAAGAGAATGTATCCTAGATGGCTACCGGTCTGATGATGCTATAAGTGAGGTTGATGATTACATGGATGCATTAGCTACTGTGGAGTCAGAATGTGAATCAGACAATGAGTGTAGACTTCAGAACAGCGTATTGAATGCTCAAAATGTGACCGATTCAAATACATATCAAATGGATACTCAATTTTCAGACTCTCAATCATTTGGAGACTCTTTCACTTCTGAAGAAATTAGTTCGACTGAGCAAGACAGAAATGAAGAGCAAGTGCAAGCTCGGTTTCCAGATTCTCAATCTGTTGGAAACTCCACACGAGAGATTGAAAATAGGCCATCCAATTTTCTTCTACAAACTGTTGAGTTGCAAAAGACGTGTGGTCAGTTTGTCATGCAAGTTGATACACTTGATCAGGGGGGAGCAATATCTCATTCTAGACCAGTTTCTTCTTCTGGTTCATCTCTGATGGAGCAAGGATGTTTATTGTTTCCTTCAGATCTTGGAGCCCCCTCACTGGTTTCCCCACTTAGAGGGACTCAATTGGATGAAACACCATCTAGCCCTCTTGAACTACATTTAAGGTTAGAAGATGATGAAGACAGGAAGTGTCTTGCTGAATCTATAGCTTCCGTATCCAGTACCTTCACCCCAATAAAGGATGACGCTTGCATAGTGGTTTCATATGATAACAATTCTTTGAACAACTTACATGTTTGTGATCCACATATTCATTCTAATGCTCTATTACAAGATTCAAATGATATAAATTTTTCTAATGAAGATGAAAGTGGTGATCCTTCTGATATCAAAGTGTTGCAGTCCAAATCTCTTAATGGATACTCTAGTGAAATTTTGGTTGGTGGAGGTATTGGTTCACAAGGAGGGGATCCCGTTTGCCTGTCCATGGAAGCACACCCGAATTCAGGCACTAAGGTGCTGCTTGATGACCGAGATTTAAAATCTGAGGATGATAAAATAGCTACCCAACTTAACTCAGACGATTTATTTCCTGTTGCGGATACTACACTAGAGAGTAGCTTTACAGAGGAACCATGCTCTAGCCATACACTTGGAAATCCACATAATGGACCAAATTCAGCAGAAATTGAAGTTCTGTACCGTGATCAGCAATCAAATTTTGAAGTGATGCCAAGCATAATGCCTGACGATGAAATAAGTGGATCCACCTGCAGTTCGGATCCAATTGAAGATGAGGATCATATTAAACGTCCACCTTGTGATGACACAAGTAAGGATAATCATGTCATGGTAAATGATAATTTCAGTGTAAAAGTTCAATCAGAAGATCAGCCTGTATCTGCTCTTTCTTCTGTCAATATTGCTGAAAATGATGCAAGTATTGTTGATTGTCTAGCGTCAAATTCTGTTTCTTCTCCATCAAGAGATCTATCAGATTTGCATGAACCTTTCCTCTGTTCTTCAGATTCACATCTGATTGAAATGGAATCCCATGATGTAGATTTAACTAAAATATCTGTTGACTTGAACGCTGATAAGATTGAAAGCAAAGTGGAACCTTCTCCAGATATCATATTTTCTCCAATATGTAGTCTTACAACGTTGGAAGAATCTCTTTCTACTTTTGCTGATCCTCATGAGAAAGAGATTGAAGTCAATGAAGCAGTTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAGAAAGAGATGGAAGTCAATGAAGCAGTTCCTGGAGAGTCTTTGGCAGAGTTGACAGCACATGAAGTAGAGGATCAACCAGAAATTGCATTTACTGATGTACAGTTGAACCTGAACAGACCAGTTCCCTGTGATCCTGTATTTAGAATATTTAATAATTTTCAACATTCATCTCTTAAGGAGAAATTCCAATATGGTTCTTCGATCAATGACATGGAAATGGTGACTTTATGTTCAGAGCAAGACTCTCAGAGATCAGGATCTATATTAGCATGCCAGAATGATATACAGAACAGTAAAGATAGTTTGTCACCACCTTTGAATGATCAACTAGAGCCTGAACAACAGGATGCAAAATTTCTGCTCAGAAATGAAGAAAGTTATACCTCTGAGAAGTTTCAAGCTCAACAGATGCAGTTATCTAATCAGTTGGAGCAGGAAAGAGTCTCTGATGCTGCTTCCAAGTTTACTGCTGAAGTTCATCCAGATGAACCTTCACATGATTCCTCACCAAAGTCTTCTGGGGAGACTAACCCAACAAAACATGTCATGGATCCATTGAAACCTCTTCTTTCCGATCTCTTTCCAAAGGAAACTAAAACCAATGTTGAGGAGACGCCACCTATGCCCCCTCTACCACCAATGCAATGGAGAACGAGCAAGGTTCAAGTTGCTTCCCTAGTTTCACAAAGAGAAGAAAAAGAAGCAAGTCAAGCGTCATTCCAACCATTACAGCCAGTTAATCATGATGATAAGGCTCAATTTGGTTTAGCAACTCCTGAAAGAGAGACCTTGCTGAGTCATAATCCATTTTTTCCTGTCATAGCTCTGGAAAGCCGTGACCACCGACACTCAGCTGGATTATCAGCGGGTGTTTCAGAGCGCGCTTCTGCTATTCCTTCGCAATTTCCTGTCATGTTAAATGAAACATCTATGGTGGAATCTCTGGACAGGCCTCCACATGGATATGCAGTTGCTTCTGAGGAACAAAGGGTATTGAATTCAAGTCCATGCCCACCAACACTGCCTGAAGAATGTGCTATTTCTGGGACTGATCCCATCTTTCAGCAAGAAAAACCAACTCAATCTCTAAGTAAATTAATGGAAGAGACTAGCTTAGAAGTTCAAACACTTGAGCAATCTTCCATTAATTTGAAAAGGGAACAAGGAGATCCTTCAGTCTTGCCTGTGTCACCATCCGGTTTTGTGCAGCCCAATCACAGTCCGGCATTGTCATTTGACGCATCTACTCAAATATCAAAGTTTCATAGTGAAATGCAAAATGGAAAACCAAAGAATAAGCTTACTCCTCCTCAGGCCCCTTCAAATGATGTTGTTGCTGCTCTTGACAAAAGCAGGCTGAGGAAAGTCAGTGAACGTGTTAGGCCTCAGATAGCACCAAAGGAGGATGAAAAGGATTCACTGTTAGAACAGATAAGAATGAAGTCTTTCAACTTGAAGCCTGCTGTGCCTAAACGTCCCAGCATTCTTGGCCCAAAAACGAACTTGAGGGTTGCTGCAATCTTGGAGAAAGCAAATTCTATTCGTCAGGCATTGGCTGGAAGTGATGAAGATGATGATGCTGATAGTTGGAGTGATTCTTGA 4386 0.4113 MPVCRYHIRNAQCLADPELRRAAGKDDSEALLEAVAVAGLVGFLRQLGDLAQFAAELFHDLHDEVMATAARGHNLISRVQQLEAEVPAIETTFLSQTHNFSFLTNGGIDWHPNLQSEQKLVTRGDLPRFIMDSYGECRGPPRLFLLDKYDVAGAGACLKRYTDPSFFTEDYASSVTKTTEVVHREKRIRKVRMQGAGSRNGETPEVLPSHTKLHQLFLEERIEDTCSDPARLVKLRKKQLDGYAVEAKSGRSYMEKILKMPSPDYKMVYETSIVPQPVKLMSDDTSETRIKILEISSNAPRKRSLGNDNTHSSWIEQESELNPYSEMDRETNRYLGKEHDQISASVTNEMSSNNLKLHDEKELVADEQEKRECILDGYRSDDAISEVDDYMDALATVESECESDNECRLQNSVLNAQNVTDSNTYQMDTQFSDSQSFGDSFTSEEISSTEQDRNEEQVQARFPDSQSVGNSTREIENRPSNFLLQTVELQKTCGQFVMQVDTLDQGGAISHSRPVSSSGSSLMEQGCLLFPSDLGAPSLVSPLRGTQLDETPSSPLELHLRLEDDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSNDINFSNEDESGDPSDIKVLQSKSLNGYSSEILVGGGIGSQGGDPVCLSMEAHPNSGTKVLLDDRDLKSEDDKIATQLNSDDLFPVADTTLESSFTEEPCSSHTLGNPHNGPNSAEIEVLYRDQQSNFEVMPSIMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSVNIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNADKIESKVEPSPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAHEKEMEVNEAVPGESLAELTAHEVEDQPEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQDSQRSGSILACQNDIQNSKDSLSPPLNDQLEPEQQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDSSPKSSGETNPTKHVMDPLKPLLSDLFPKETKTNVEETPPMPPLPPMQWRTSKVQVASLVSQREEKEASQASFQPLQPVNHDDKAQFGLATPERETLLSHNPFFPVIALESRDHRHSAGLSAGVSERASAIPSQFPVMLNETSMVESLDRPPHGYAVASEEQRVLNSSPCPPTLPEECAISGTDPIFQQEKPTQSLSKLMEETSLEVQTLEQSSINLKREQGDPSVLPVSPSGFVQPNHSPALSFDASTQISKFHSEMQNGKPKNKLTPPQAPSNDVVAALDKSRLRKVSERVRPQIAPKEDEKDSLLEQIRMKSFNLKPAVPKRPSILGPKTNLRVAAILEKANSIRQALAGSDEDDDADSWSDS* 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3311 1461 MobiDBLite consensus disorder prediction 767 785 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 1084 1114 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 1150 1176 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 429 479 - -
Lja1g3311 1461 PANTHER WASP-1 1 456 IPR028288 GO:0005856|GO:0030036
Lja1g3311 1461 PANTHER WASP-1 860 1302 IPR028288 GO:0005856|GO:0030036
Lja1g3311 1461 PANTHER WASP-1 1292 1461 IPR028288 GO:0005856|GO:0030036
Lja1g3311 1461 MobiDBLite consensus disorder prediction 1150 1174 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 429 445 - -
Lja1g3311 1461 Gene3D - 1 90 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 753 785 - -
Lja1g3311 1461 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 456 - -
Lja1g3311 1461 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 860 1302 - -
Lja1g3311 1461 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1292 1461 - -
Lja1g3311 1461 PANTHER WASP-1 456 875 IPR028288 GO:0005856|GO:0030036
Lja1g3311 1461 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 456 875 - -
Lja1g3311 1461 Gene3D - 104 242 - -
Lja1g3311 1461 Gene3D - 1344 1460 - -
Lja1g3311 1461 MobiDBLite consensus disorder prediction 460 479 - -
Lja1g3311 1461 Coils Coil 1295 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3311 Lja-Chr1 41173617 41181944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3311 - - lja:Lj4g3v2151410.1 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3311 1 41173617 41181944 Lja1g3311 1 41173617 41181944 ECH
Lja1g3311 1 41173617 41181944 Lja3g3397 3 66977364 66985963 PCT