Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3384 ATGGCTCTCAAAACCCTCATATTCTCCTTCCTCGTCCTCTCCTTCCACACCCTCACCACTGCCGCCACCGCCGACCAACCAAGTTTCTTCGTGCGTTCCATAGACCGTGAGATGACCGAGAAGAAAGAAAACTACAGCCACTTCCGGTTCTACTGGCAAGACATCGTGGGCGGGGCCAACGCCACCTCCATCCCAATCATTGAATCAATCCCTAAGTTCAACCTCACCAGTACCTTCGGTCTGACTAGGGTCATCGACAATGCTCTGACGGTGGGACCCAATCGGACCTCGAAGCTGGTGGGGCGGGCTCAGGGTTTTTACGTCTCCACATCTCAAACAGAGTACGATTTTTTGATGATTCAGACTTTCGTGCTGTTCGAAGGAGTGTACAACGGGAGCAGCATCACCTTCTTGGCGAGGAACCCAATTAACGAGAAGGTGAGGGAGTTGCCGGTGGTAGGAGGCGTTGGGCGTTTCCGGTTTGCTAAGGGATATGCTCGTGTTAACACCATCTCTTTTGATTACCTAACGGGTGATACAACCGTTGAGTACAACGTTTATGTTTCCCATTATCATCATTAG 582 0.5103 MALKTLIFSFLVLSFHTLTTAATADQPSFFVRSIDREMTEKKENYSHFRFYWQDIVGGANATSIPIIESIPKFNLTSTFGLTRVIDNALTVGPNRTSKLVGRAQGFYVSTSQTEYDFLMIQTFVLFEGVYNGSSITFLARNPINEKVRELPVVGGVGRFRFAKGYARVNTISFDYLTGDTTVEYNVYVSHYHH* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3384 193 PANTHER DIRIGENT PROTEIN 7 9 190 - -
Lja3g3384 193 Pfam Dirigent-like protein 46 188 IPR004265 -
Lja3g3384 193 Gene3D - 32 187 IPR044859 -
Lja3g3384 193 PANTHER NUCLEOPORIN-RELATED 9 190 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3384 Lja-Chr3 66697456 66698419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3384 - - adu:107475368 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3329 1 41378391 41379612 Lja3g3384 3 66697456 66698419 PCT