Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3370 ATGGCAAAGGCCCACCAAATAGCGCTAGGGTGCACCTTGGGAATCAGAAACGCCTTTCAGTCTCTTGCAGCTATCTTAACCACTATTCTAGTTGTCACTGCCATATATCTAACACAGGAAGGAGGACAATGGTTTCAAGAAAGGACCCTCTCGGCTGAATCATTATCAAAATGCAACTTTTTCTCTGGTAAGTGGGTTTTTGACAACAAATCTTATCCAATTTACAAAGAACAGCAGTGCACATTCATGTCAGATCAACTGGCTTGTGAGAAGTTTGGAAGGAAGGACCTGAGTTACCAGAATTGGAAGTGGAAGCCCCACCAGTGTGATCTACCCAGGTTCAATGCCACAGCATTGCTTGAGAGGCTAAGGAATAAGAGGCTTGTGTTTGTTGGGGATTCACTCAACAGAGGCCAATGGGTTTCCATGGTTTGCCTTGTTGAATCTTCACTCTCCCCTAACCTGAAATCCATGAGTACCATTGCCAATGGTTCACTCAGCATTTTCAAGGCCAAAGAATACAATGCAACCATCGAGTTCTACTGGGCCCCATTACTAGTAGAATCAAATTCAGATGATCCTGTGAACCATAAGGTACCAGATCGGATTGTGAGAGTAAAAGCCATTGAGAAACATGCTAAGCACTGGACCAATGCAGACATTCTGGTATTCAACACTTTCCTCTGGTGGAGGAGGCGTGCAATGAATGTTCTGTGGGGGTCATTTGGAGACACTGGTGGAGTGTTCAAAAAGGTAGAAATGGTGAGAGTCTATGAGTTGGCTTTGAGGACCTGGTCCGACTGGTTGGAACTCCATGTTAATCCTAACAAGACCCAGTTGTTTTTTGTCTCAATGTCACCTACTCATCAAAGGGCTCATGAATGGGGAGGAGCTAAGGGTGAGAATTGTTACAAGGAAACAGATATAATTACAGAAGAGGGATACTGGGGGAATGGTTCTGTTCCTAAAATGATGCGAGTTGTGGAAAATGTGGTTGAAGATTTAAAGGGGAGAGGTTTAGAAGTTCAAATACTTAACATCACACAGCTCTCAGAGTACAGGAAAGAAGGTCATCCATCTATCTATAGGAAGCAATGGGAACCTTTAACAGAAGAACAGATATCAAATCCAGAAAGTTATGCAGATTGCATACATTGGTGCCTCCCTGGAGTGCCAGATACGTGGAATGAGCTCCTCTATGCCTATATTTTCCATAGATAA 1221 0.4349 MAKAHQIALGCTLGIRNAFQSLAAILTTILVVTAIYLTQEGGQWFQERTLSAESLSKCNFFSGKWVFDNKSYPIYKEQQCTFMSDQLACEKFGRKDLSYQNWKWKPHQCDLPRFNATALLERLRNKRLVFVGDSLNRGQWVSMVCLVESSLSPNLKSMSTIANGSLSIFKAKEYNATIEFYWAPLLVESNSDDPVNHKVPDRIVRVKAIEKHAKHWTNADILVFNTFLWWRRRAMNVLWGSFGDTGGVFKKVEMVRVYELALRTWSDWLELHVNPNKTQLFFVSMSPTHQRAHEWGGAKGENCYKETDIITEEGYWGNGSVPKMMRVVENVVEDLKGRGLEVQILNITQLSEYRKEGHPSIYRKQWEPLTEEQISNPESYADCIHWCLPGVPDTWNELLYAYIFHR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3370 406 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 111 401 IPR026057 GO:0016740
Lja3g3370 406 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 7 406 - -
Lja3g3370 406 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 7 406 IPR029962 GO:0016413
Lja3g3370 406 Pfam PMR5 N terminal Domain 57 110 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3370 Lja-Chr3 66421628 66424114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3370 - - gmx:100789678 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3370 3 66421628 66424114 Lja3g3370 3 66421628 66424114 ECH
Lja1g3341 1 41572094 41574412 Lja3g3370 3 66421628 66424114 PCT