Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3341 ATGGCAAAGACACCCCAAATAGTGGTAGTAGGGAGCAGTACTTGGGGAATCAGAAACATCTTTCATTCTCTTCTAGCCATCTTAACCACTCTTCTAGTTATCACGACCATTTATCTAACACAAGAGGGAGCACAATTAAAGTCTCCAAAAACAAATAATGTCTCTTGTGATGAGTCATTGTCATCATCAAGTTCAAAATGTGACTTGTTCTCTGGGAAGTGGGTTTTTGATAACGAATCTTATCCACTTTACAAAGAGCATCAATGCAGTTTCATGTCAGATCAATTGGCTTGTGGGAAGTATGGAAGGAAGGACCTGAGTTACCAGAACTGGAGATGGAAGCCCCACCAGTGTGACCTTCCTAGGTTCAACGCCACAGCATTGCTTGAGAGGCTGCGAAACAAGAGGCTTGTGTTTGTGGGGGATTCACTTAACAGAGGCCAATGGGTTTCCTTGGTTTGCCTTGTTGATTCTTCATTGCCCCAAACTCTCAAATCCATGCATTCCAAGGCCAATGGTTCACTAAACATTTTCAAGGCCAAAGAATACAATGCAACCATTGAGCACTATTGGGCCCCATTACTTGTAGAATCAAACTCAGATGATCCAGTAAACCATAGGGTACCCGAGCGCACTGTGAGGGTCAAGGCCATTGAAAAACATGCAAGGTACTGGACTGATGCAGATTATCTAGTCTTCAACACTTACCTCTGGTGGAGAAGGCCTGTCATGAATGTTCTGTGGGGATCATTTGGAGAGCCAAATGGGGTTTACAAAGGTGTTGAAATGTTGAGAGTCTATGAAATGGCCCTAAGGACCTGGTCTGATTGGTTGGAAATCCATGTCAATCGTACCAAGACCCACTTGTTTTTTGTTGGCATGTCACCCACTCATGAAAGGGCTGAAGAATGGGGAGCAGCCAAGGGGGATACTTGCTACAAAGAAATAGATATGATAGCGAAAGAGGGGTATTGGGGGAAAGGGTCTGATCCTAAAATGATGCATGTGGTAGAGAAGGTGCTTGATGATTTGAAAACCAGAGGTTTGAATGTTCAAATGCTTAACATCACACAGCTCTCAGAATACAGAAAAGAAGGTCATCCATCTATCTACAAGAAGCAGTGGGAACCTCTAACCAAAGAACAGATTACAAATCCAAATAGTTATGCAGATTGCATACACTGGTGCCTCCCTGGAGTTCCTGATGTGTGGAATGAGCTCCTTTATGCTTATATTTTCAACCAATAA 1248 0.4311 MAKTPQIVVVGSSTWGIRNIFHSLLAILTTLLVITTIYLTQEGAQLKSPKTNNVSCDESLSSSSSKCDLFSGKWVFDNESYPLYKEHQCSFMSDQLACGKYGRKDLSYQNWRWKPHQCDLPRFNATALLERLRNKRLVFVGDSLNRGQWVSLVCLVDSSLPQTLKSMHSKANGSLNIFKAKEYNATIEHYWAPLLVESNSDDPVNHRVPERTVRVKAIEKHARYWTDADYLVFNTYLWWRRPVMNVLWGSFGEPNGVYKGVEMLRVYEMALRTWSDWLEIHVNRTKTHLFFVGMSPTHERAEEWGAAKGDTCYKEIDMIAKEGYWGKGSDPKMMHVVEKVLDDLKTRGLNVQMLNITQLSEYRKEGHPSIYKKQWEPLTKEQITNPNSYADCIHWCLPGVPDVWNELLYAYIFNQ* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3341 415 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 120 410 IPR026057 GO:0016740
Lja1g3341 415 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 9 414 - -
Lja1g3341 415 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 414 IPR029962 GO:0016413
Lja1g3341 415 Pfam PMR5 N terminal Domain 66 119 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3341 Lja-Chr1 41572094 41574412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3341 - - gmx:100785941 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3341 1 41572094 41574412 Lja1g3341 1 41572094 41574412 ECH
Lja1g3341 1 41572094 41574412 Lja3g3370 3 66421628 66424114 PCT