Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3365 ATGGATCAGATATTCGGCAAGGTTGGATCCTATTGGTTTAACCAGAAAGCCTCCAAGGAGATCAATTCCGTCGGCGACGACATCAACTCACTGTCAAACACTCTCGAAGAGGGAAGCAAATGGTTGGTCAACAAATTAAAAGGAAAGATGCAAAAGCCATTAACGGAGCTGCTAAAGGAGTATGATCTACCAATCGGAATCTTTCCTCGTGACGCAACAAACTATGAATTTAACCCAGAGACAGGAAAGCTTGTTGTTTACATTCCTCAAGTCTGTGAAGTAGGCTACAAGGATTCATCAGTTTTACGCTTCTTCACCACCGTGACTGGTTATCTGGAGAAAGGAAAGCTAGCAGACATAGAGGGAATGAAGACAAAAGTGTTGATCTGGGTAAAAGTGACAACCATTTCCTCGGAGGGATCGAAGCTCTATGTGACTGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCATATGAAGTTACAAGAGATGGTATATGTATAGATAAGTTCTAA 513 0.423 MDQIFGKVGSYWFNQKASKEINSVGDDINSLSNTLEEGSKWLVNKLKGKMQKPLTELLKEYDLPIGIFPRDATNYEFNPETGKLVVYIPQVCEVGYKDSSVLRFFTTVTGYLEKGKLADIEGMKTKVLIWVKVTTISSEGSKLYVTAGMKKTRSREAYEVTRDGICIDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3365 170 PANTHER DUF538 FAMILY PROTEIN 11 170 - -
Lja3g3365 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Lja3g3365 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
Lja3g3365 170 Gene3D - 32 170 IPR036758 -
Lja3g3365 170 PANTHER T31J12.3 PROTEIN-RELATED 11 170 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3365 Lja-Chr3 66387753 66391700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3365 - - gmx:100500143 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3365 3 66387753 66391700 Lja3g3365 3 66387753 66391700 ECH
Lja1g3344 1 41594769 41598200 Lja3g3365 3 66387753 66391700 PCT