Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3344 ATGGATGAGCTATTGAACAAGGTTGGCTCATACTGGTTCAGCAAGAAGGCCAACAAGGAGCTTAACTCTGTCGGTGATGATATCAACTCACTTTCAACAAGTATTGAAGGAGGAACTAAATGGTTGGTCAACAAATTAAAAGGAAAGATGCAAAAGCCATTAATAGAGTTGCTAAAGGAGCATGATCTACCGATAGGCATTTTTCCTCGTGACGCAACCAACTATGAATTTAACGAACAAACAGGGAAGCTTGTTGTATACATTCCTCAAGTGTGTGAAGTAGGATACAGGGACTCATCAGTCTTGCGTTTCTCCACCAGTGTGTCTGGTTATTTAGAGAAAGGCAAGTTAACAGACATTGAGGGAATGAAAACCAAAGTGCTGATCTGGGCAAAAGTGACCACCATTACATCTGAGGGATCCAAGCTCCATTTCTCGGCTGGAATGAAGAAAACGAGGAGAAAGGAGGCATATGAGGTTTCTAGAGATGGTGTAAGCGTAGATAAATTCTAA 513 0.4152 MDELLNKVGSYWFSKKANKELNSVGDDINSLSTSIEGGTKWLVNKLKGKMQKPLIELLKEHDLPIGIFPRDATNYEFNEQTGKLVVYIPQVCEVGYRDSSVLRFSTSVSGYLEKGKLTDIEGMKTKVLIWAKVTTITSEGSKLHFSAGMKKTRRKEAYEVSRDGVSVDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3344 170 SUPERFAMILY At5g01610-like 3 170 IPR036758 -
Lja1g3344 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Lja1g3344 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Lja1g3344 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
Lja1g3344 170 Gene3D - 32 170 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3344 Lja-Chr1 41594769 41598200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3344 - - gmx:100305947 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3344 1 41594769 41598200 Lja1g3344 1 41594769 41598200 ECH
Lja1g3344 1 41594769 41598200 Lja3g3365 3 66387753 66391700 PCT